Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 111 2e-19
>seq4
Length=1221263
Score = 111 bits (122), Expect = 2e-19
Identities = 383/592 (65%), Gaps = 13/592 (2%)
Strand=Plus/Plus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| || ||| || || ||| || | || || ||||| ||||| | ||||||||
Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| ||||| || ||||| |||| ||||| ||||| || || | || || || |||
Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
||||| ||||| || |||| ||||| || | |||| || || || |||||
Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364
Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194
|||| | |||||| || |||| ||||| || | ||| || || || || ||
Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424
Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254
||||| || || || || ||||| | | || | || || || || || | |
Sbjct 1137425 ATGGCATTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAA 1137484
Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA--TCGGG 17312
||| | || ||||| ||||||||||| || || || ||||| || || || |
Sbjct 1137485 GAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAG- 1137543
Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372
||| | | |||||| || | |||| || | | || ||||| || || ||||
Sbjct 1137544 -TTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGT 1137602
Query 17373 CGCTCGCGGCGAAAAACGCCAATA-TATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA 17431
| |||||||| || ||||| | | || ||||||||| | |||| || |
Sbjct 1137603 CAGAGGCGGCGAAGAAGGCCAAAACTCTG-GAGATGAAATATCTCTCGT--TGTCGTTCA 1137659
Query 17432 ACGCG-----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAAC 17486
|| | |||||| | | ||| || || || | || |||| |||||| |||
Sbjct 1137660 ACTTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAG 1137719
Query 17487 TAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
|||| | ||||| || ||||| | ||| || || | ||| | || |||||
Sbjct 1137720 AAGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAA 1137771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545528837480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |