Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4 111 2e-19 >seq4 Length=1221263 Score = 111 bits (122), Expect = 2e-19 Identities = 383/592 (65%), Gaps = 13/592 (2%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||| || || ||| || | || || ||||| ||||| | |||||||| Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| || ||||| |||| ||||| ||||| || || | || || || ||| Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 ||||| ||||| || |||| ||||| || | |||| || || || ||||| Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 |||| | |||||| || |||| ||||| || | ||| || || || || || Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||||| || || || || ||||| | | || | || || || || || | | Sbjct 1137425 ATGGCATTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAA 1137484 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA--TCGGG 17312 ||| | || ||||| ||||||||||| || || || ||||| || || || | Sbjct 1137485 GAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAG- 1137543 Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372 ||| | | |||||| || | |||| || | | || ||||| || || |||| Sbjct 1137544 -TTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGT 1137602 Query 17373 CGCTCGCGGCGAAAAACGCCAATA-TATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA 17431 | |||||||| || ||||| | | || ||||||||| | |||| || | Sbjct 1137603 CAGAGGCGGCGAAGAAGGCCAAAACTCTG-GAGATGAAATATCTCTCGT--TGTCGTTCA 1137659 Query 17432 ACGCG-----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAAC 17486 || | |||||| | | ||| || || || | || |||| |||||| ||| Sbjct 1137660 ACTTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAG 1137719 Query 17487 TAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 |||| | ||||| || ||||| | ||| || || | ||| | || ||||| Sbjct 1137720 AAGCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAA 1137771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545528837480