Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 4e-32
>seq1
Length=2934271
Score = 152 bits (168), Expect = 4e-32
Identities = 312/459 (68%), Gaps = 21/459 (5%)
Strand=Plus/Plus
Query 101653 TCTAGGAGTTCGCGTCAACTGCATTT-TAAGAGCATCAATGTGATCTACATAGATGTGAG 101711
||||||||||| ||||| || ||| ||| ||||||||||| | ||| | ||||
Sbjct 112735 TCTAGGAGTTCTTTCAAACTGTTGTTGTAACAGC-TCAATGTGATCCAAATACACATGAG 112793
Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGAT-TAGTGACAT-GAGCAATCAT 101769
||||||| || ||||| || || |||||| || | || | |||| |||| |||||
Sbjct 112794 CATCTCCCATGGTATGAATGAAATCTCCA--CAGTTCATATCACAACATTGAGCGATCAT 112851
Query 101770 GCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGA 101829
|| || | || |||||||||||||| || || || || || ||||||||| |||
Sbjct 112852 CTTGGTCAATAAAGCGTAGCTAGCAATGTTGAAAGGAACACCCAATCCCATATCACATGA 112911
Query 101830 TCTTTGATACAGTTGACAGGAAA---------GCTTTCCATC------ACAGACATAAAA 101874
||||||||| | | ||| || | |||||| || | ||||| ||
Sbjct 112912 TCTTTGATATAATAAACATGACAATTCCGGTTTCTTTCCCTCTGGGAAATTCACATAGAA 112971
Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934
||||| ||||||||||| || || || |||| | | | |||| |||||||||
Sbjct 112972 TTGACAGAATACATGACATGGTGGTAAAGCCATCTGGGCGAAATCTGGTGGATTCCAAGC 113031
Query 101935 ACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA 101994
|| ||| | || || | || ||| || || |||| | | ||| | || | |
Sbjct 113032 ACTCATAATGATTCTACGGTCATAAGGATTAGTCTTTAACTTGTGAATGATCTCTGCAAG 113091
Query 101995 TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054
||||||| ||||| ||| |||||| | || | |||| ||||| || ||||||||
Sbjct 113092 TTGGTCATATCCTTGACCTGAATAATCCAGATCACAATCTTTGTATTCGGCACCGAAATG 113151
Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTC 102093
||||| || || ||||| || ||||| | ||| || ||
Sbjct 113152 TCTCCATTGGAACCCATAAACCGGTCCCAAATCACCCTC 113190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361251151569761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |