Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 154 1e-32 >seq1 Length=2934271 Score = 154 bits (170), Expect = 1e-32 Identities = 344/510 (67%), Gaps = 21/510 (4%) Strand=Plus/Plus Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCT-GTGAGAGCATCAATGT 97057 ||| | ||| ||||| || ||||||| || ||| | | || | ||| ||||||| Sbjct 112717 CTTCAATGTAGGGAATTCTCTAGGAGTTCTTTCAAACTGTTGTTGTAACAGC-TCAATGT 112775 Query 97058 GATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG 97117 ||| || ||| | ||||||||||| | || ||||| || |||||| | |||| Sbjct 112776 GATCCAAATACACATGAGCATCTCCCATGGTATGAATGAAATCTCCACAGTTCATATCAC 112835 Query 97118 TGACATGG-GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||| | |||||||| || |||| || |||||||||||||| ||||| || || Sbjct 112836 A-ACATTGAGCGATCATCTTGGTCAATAAAGCGTAGCTAGCAATGTTGAAAGGAACACCC 112894 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAA---------GCTTTCCATC- 97226 | |||||||||| ||||||||||||||| ||| || | |||||| || Sbjct 112895 AATCCCATATCACATGATCTTTGATATAATAAACATGACAATTCCGGTTTCTTTCCCTCT 112954 Query 97227 -----ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACA 97281 | |||||| || |||| ||||||||||| || || || ||||| | | | | Sbjct 112955 GGGAAATTCACATAGAATTGACAGAATACATGACATGGTGGTAAAGCCATCTGGGCGAAA 113014 Query 97282 TCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTA 97341 ||| ||||||||||| ||| | ||||| | || || || || | || | Sbjct 113015 TCTGGTGGATTCCAAGCACTCATAATGATTCTACGGTCATAAGGATTAGTCTTTAACTTG 113074 Query 97342 TTAATTATCTGCTTTAA-TTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTG 97400 | ||| |||| || || ||| ||| |||| || ||||| | | | | ||| Sbjct 113075 TGAATGATCT-CTGCAAGTTGGTCATATCCTTGACCTGAATAATCCAGATCACAATCTTT 113133 Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 ||||| || || ||||| ||||||||||| |||||||| ||||| | || || ||| Sbjct 113134 GTATTCGGCACCGAAATGTCTCCATTGGAACCCATAAACCGGTCCCAAATCACCCTCTCT 113193 Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATA 97490 ||||| ||||| | |||||| || || Sbjct 113194 TCTATGGGTTAAACCTAACTTATCCAAGTA 113223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783953509270