Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 1e-32
>seq1
Length=2934271
Score = 154 bits (170), Expect = 1e-32
Identities = 344/510 (67%), Gaps = 21/510 (4%)
Strand=Plus/Plus
Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCT-GTGAGAGCATCAATGT 97057
||| | ||| ||||| || ||||||| || ||| | | || | ||| |||||||
Sbjct 112717 CTTCAATGTAGGGAATTCTCTAGGAGTTCTTTCAAACTGTTGTTGTAACAGC-TCAATGT 112775
Query 97058 GATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG 97117
||| || ||| | ||||||||||| | || ||||| || |||||| | ||||
Sbjct 112776 GATCCAAATACACATGAGCATCTCCCATGGTATGAATGAAATCTCCACAGTTCATATCAC 112835
Query 97118 TGACATGG-GCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
|||| | |||||||| || |||| || |||||||||||||| ||||| || ||
Sbjct 112836 A-ACATTGAGCGATCATCTTGGTCAATAAAGCGTAGCTAGCAATGTTGAAAGGAACACCC 112894
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAA---------GCTTTCCATC- 97226
| |||||||||| ||||||||||||||| ||| || | |||||| ||
Sbjct 112895 AATCCCATATCACATGATCTTTGATATAATAAACATGACAATTCCGGTTTCTTTCCCTCT 112954
Query 97227 -----ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACA 97281
| |||||| || |||| ||||||||||| || || || ||||| | | | |
Sbjct 112955 GGGAAATTCACATAGAATTGACAGAATACATGACATGGTGGTAAAGCCATCTGGGCGAAA 113014
Query 97282 TCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTA 97341
||| ||||||||||| ||| | ||||| | || || || || | || |
Sbjct 113015 TCTGGTGGATTCCAAGCACTCATAATGATTCTACGGTCATAAGGATTAGTCTTTAACTTG 113074
Query 97342 TTAATTATCTGCTTTAA-TTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTG 97400
| ||| |||| || || ||| ||| |||| || ||||| | | | | |||
Sbjct 113075 TGAATGATCT-CTGCAAGTTGGTCATATCCTTGACCTGAATAATCCAGATCACAATCTTT 113133
Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460
||||| || || ||||| ||||||||||| |||||||| ||||| | || || |||
Sbjct 113134 GTATTCGGCACCGAAATGTCTCCATTGGAACCCATAAACCGGTCCCAAATCACCCTCTCT 113193
Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATA 97490
||||| ||||| | |||||| || ||
Sbjct 113194 TCTATGGGTTAAACCTAACTTATCCAAGTA 113223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346783953509270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |