Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 2e-27
>seq5
Length=1057341
Score = 138 bits (152), Expect = 2e-27
Identities = 177/244 (73%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592
|||||||||||||| || | ||||| || || || || ||||| || | ||| |||||
Sbjct 899719 AATACAATGCAAATCTTCGTTAAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGAA 899660
Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652
| ||| || ||| || | || || || |||||||| |||||||| ||||||
Sbjct 899659 TCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCT 899600
Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712
|| |||||||| | || ||||| || || ||||| || ||| || |||| || ||
Sbjct 899599 GACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGAC 899540
Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAA 124772
|| || || ||||| ||||| || ||||| |||||||| | || |||||||||| ||
Sbjct 899539 TACAACATCCAAAAGGAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGGTATGCAA 899480
Query 124773 AATT 124776
| ||
Sbjct 899479 ATTT 899476
Score = 136 bits (150), Expect = 6e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| | || || || ||||| ||| | || ||||| | |
Sbjct 899257 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 899198
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || ||||||||||| ||||| ||||| |||||||| |||
Sbjct 899197 GACACTATTGACAATGTTAAGTCCAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 899138
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || ||||| || ||| || |||| ||| || || ||
Sbjct 899137 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCTGACTACAAC 899078
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||||| ||||| || || ||||| | || ||||||||||
Sbjct 899077 ATCCAAAAGGAATCCACTTTACACTTAGTTTTGAGATTGAGAGGTGGTAT 899028
Score = 122 bits (134), Expect = 1e-22
Identities = 166/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || ||||| || || || || | || ||||| | |
Sbjct 274226 ATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 274285
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || || || ||||| || |||||||| |||||||| |||
Sbjct 274286 GACACTATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 274345
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || ||||||||||| | |||| || || || ||
Sbjct 274346 CAAAGATTGATCTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCCGACTACAAC 274405
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| ||||| ||||| |||||||| |||||||| | || |||||||| |||
Sbjct 274406 ATCCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGTGTTA 274457
Score = 118 bits (130), Expect = 2e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||| || || ||||| ||| | || ||||| |
Sbjct 899029 ATGCAAATCTTCGTCAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 898970
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || ||||||||||| ||||| ||||| |||||||| |||
Sbjct 898969 GACACCATTGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 898910
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | ||||| || || || ||||| || ||| || |||| || ||||| ||
Sbjct 898909 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 898850
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|||||||| ||||| ||| | || || || || | ||| |||| |||
Sbjct 898849 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGAGGT 898802
Score = 109 bits (120), Expect = 8e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| | || || || || || || | ||| |||| |
Sbjct 899485 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACCATTACCCTTGAGGTTGAGTCTTCC 899426
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || || |||||||| || |||||||| || || ||||||
Sbjct 899425 GACACCATTGACAATGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 899366
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||||||||||| | |||| || || || ||
Sbjct 899365 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCTGACTACAAC 899306
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||||| ||||| || | || ||||| ||| | || ||||||||||
Sbjct 899305 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTAAGATTGAGAGGTGGTAT 899256
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455896124800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |