Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5 120 5e-22 seq8 86.0 9e-12 >seq5 Length=1057341 Score = 120 bits (132), Expect = 5e-22 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | |||||| ||||| || | |||||||| ||| || || || || || || Sbjct 899259 CCACCTCTCAATCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGA-ATGTTGTAGTCAGA 899317 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||||| || |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct 899318 CAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGG 899377 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| ||||| || ||||| Sbjct 899378 AATACCTTCCTTGTCTTG 899395 Score = 102 bits (112), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || ||||| | ||| || || || || | ||||||||| ||| || || || ||||| || Sbjct 898803 CCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGA-ATGTTGTAATCAGA 898861 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | |||||| | ||| || ||||| || ||||| |||||||||||||| || || || || Sbjct 898862 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 898921 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| || ||||| ||||| Sbjct 898922 AATACCCTCTTTGTCTTG 898939 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || ||||| ||||| || || || || || || Sbjct 274452 CCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 274393 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||||| || |||||||| || |||||||| ||||||||||| || || || || Sbjct 274392 AAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 274333 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 274332 ATACCTTCCTTGTCTTG 274316 >seq8 Length=648860 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || || || || || || || || || || || Sbjct 616582 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 616641 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || ||||| || |||||||| ||||||||||| || || || || Sbjct 616642 AAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 616701 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || ||||| Sbjct 616702 ATACCCTCCTTGTCTTG 616718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743526297765120