Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 2e-17
>seq4
Length=1221263
Score = 104 bits (114), Expect = 2e-17
Identities = 289/437 (66%), Gaps = 6/437 (1%)
Strand=Plus/Plus
Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260
||||| ||||| || || | || ||||||||||| || | ||||| || || ||
Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250
Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320
|| |||||||| || |||| || || ||||| || || | ||| || || || |||
Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310
Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380
|| || || ||||| |||||||| || | |||| || || ||| | || | ||||
Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370
Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440
|||||| | |||||| || | || | || ||| | || || || || |||
Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430
Query 14441 TTAAATAA-ATGT-TCCTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTA 14497
|| || || | || |||| |||| | | |||| ||||| || ||||| | ||
Sbjct 1137431 TTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG--ATGTAGGTGTCAATCAACAAAGAG 1137487
Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557
|| | |||||||| ||||| ||||| || || ||||| || ||||| | |||
Sbjct 1137488 TAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTCA 1137547
Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617
| ||| ||||| | | || | || |||| || || || || ||||| |||
Sbjct 1137548 GGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGAG 1137607
Query 14618 GCTGCAAAAAATGCCAA 14634
|| || || || |||||
Sbjct 1137608 GCGGCGAAGAAGGCCAA 1137624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345533677480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |