Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4 104 2e-17 >seq4 Length=1221263 Score = 104 bits (114), Expect = 2e-17 Identities = 289/437 (66%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 ||||| ||||| || || | || ||||||||||| || | ||||| || || || Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 || |||||||| || |||| || || ||||| || || | ||| || || || ||| Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14380 || || || ||||| |||||||| || | |||| || || ||| | || | |||| Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370 Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440 |||||| | |||||| || | || | || ||| | || || || || ||| Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430 Query 14441 TTAAATAA-ATGT-TCCTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 || || || | || |||| |||| | | |||| ||||| || ||||| | || Sbjct 1137431 TTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG--ATGTAGGTGTCAATCAACAAAGAG 1137487 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 || | |||||||| ||||| ||||| || || ||||| || ||||| | ||| Sbjct 1137488 TAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTCA 1137547 Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617 | ||| ||||| | | || | || |||| || || || || ||||| ||| Sbjct 1137548 GGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGAG 1137607 Query 14618 GCTGCAAAAAATGCCAA 14634 || || || || ||||| Sbjct 1137608 GCGGCGAAGAAGGCCAA 1137624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345533677480