Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 8e-16
seq8 87.8 1e-12
>seq5
Length=1057341
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/214 (71%), Gaps = 1/214 (0%)
Strand=Plus/Plus
Query 18112 TAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAAT 18171
|||| |||| |||||| || ||||| ||||||||||||||||| | || ||| | | |
Sbjct 899273 TAAG-ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCGT 899331
Query 18172 CTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTAT 18231
| || ||||| || || ||| | || | |||||||||||| || | |||||||| |
Sbjct 899332 CCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT 899391
Query 18232 CGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291
| ||| | ||| || | ||| ||||| | ||| |||| ||| |||
Sbjct 899392 CTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCAACCTCAAGGGTAATGG 899451
Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| || |||||||| || || || |||||||||||
Sbjct 899452 TCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 899505 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 899564
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||||||
Sbjct 899565 AATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGG 899624
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| || || |||| ||| || | ||
Sbjct 899625 ATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTAATAGTCTTA 899684
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|| || | || || || || |||||||||
Sbjct 899685 CCAGTAAGAGTCTTAACGAAGATTTGCATT 899714
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| | || ||| | || | |||||| || ||||| |||||||||||||| || | |
Sbjct 898803 CCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCAGAC 898862
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| ||| |||||||||||| || || || | || | ||||||||| || ||
Sbjct 898863 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGA 898922
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| || || || || ||||| |||||| | ||| ||||| || || |
Sbjct 898923 ATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCAACT 898982
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||| | || || || || ||||| || || ||||||||
Sbjct 898983 TCCAAAGTGATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCAT 899029
Score = 87.8 bits (96), Expect = 1e-12
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 18121 TGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATT 18180
||| ||||| ||||| ||||| ||||||||||| | | ||| ||| |||||||||||
Sbjct 899055 TGTAAAGTG--GATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCCAATT 899112
Query 18181 GTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTT 18240
| || || ||| |||| | ||||||||| || || | || || || || |||||
Sbjct 899113 GCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCCTCTTTGTCTTGAATTT 899172
Query 18241 GTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGG 18300
||| || | ||| ||||||| | || ||| | ||||| | || || |
Sbjct 899173 TGGACTTAACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATAGTCTTACCAG 899232
Query 18301 TCAATGTTTTTACAAAAATTTGCAT 18325
|||| || || ||||| ||||||||
Sbjct 899233 TCAAAGTCTTAACAAAGATTTGCAT 899257
>seq8
Length=648860
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || || || ||||| ||||||||||| | || ||| ||| ||| |||
Sbjct 616600 ACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCCTCC 616659
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | || ||||| ||
Sbjct 616660 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 616719
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | || ||| | ||| ||| | ||
Sbjct 616720 ATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCCAAGGTAATGGTCTTA 616779
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329
|| ||||| || || || ||||||||||| |||
Sbjct 616780 CCTGTCAAAGTCTTAACGAAAATTTGCATCTTT 616812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379343949144195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |