Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 264 1e-65
seq5 93.3 4e-14
seq8 87.8 2e-12
>seq1
Length=2934271
Score = 264 bits (292), Expect = 1e-65
Identities = 1178/1847 (64%), Gaps = 36/1847 (2%)
Strand=Plus/Minus
Query 22154 TAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT 22213
|| ||||| || ||||||| |||| ||||||| |||| || || || ||||| ||
Sbjct 86958 TAGTACATACCGGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTA 86899
Query 22214 CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCT 22273
|| | | || | || | | ||| || || ||| ||||| || | || ||
Sbjct 86898 CCCATAGTTGGGGCCTTGATATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCA 86839
Query 22274 CGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGT 22333
|| ||||| ||||| | || | || |||| |||||| ||||||||||| | |
Sbjct 86838 CGGTCGGCAGCCATGTCAATGATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATT 86779
Query 22334 TGCCTGATCTCTAACGGTATCGATTCG-ATCCTCTGGACGGACCCGTTATTGTGTATGAT 22392
| | | | || || || | || | | | || | || ||||||| | |||||
Sbjct 86778 TTCTTCAATTCATCTGGGAT-GTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGAT 86720
Query 22393 CAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCT-TTGACCAG-ATGA 22450
|| || || | ||||||||||| || | | ||||||| || || || |||
Sbjct 86719 ATGGTTCTTCATGGAGTCGTTCCACAATCCCAAATCAACCAAATCTCTTAACAAGTATG- 86661
Query 22451 CGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
|||| || | ||| || || |||| ||| || | | ||||||||| || ||| ||
Sbjct 86660 -GGTTGACAATTTGGAATTCACCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTAC 86602
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
|| |||||| |||| |||| |||| || |||| || ||||| || ||||| || ||
Sbjct 86601 GGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCA 86542
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCC 22630
| || | |||||||||| |||||||| | | | | ||| | || |||||||
Sbjct 86541 ACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAATCTCTCCTTCAACAGATCCCAGTCC 86482
Query 22631 CACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCC 22690
|||| |||| ||| | ||||||||| |||| |||| || | || || ||
Sbjct 86481 CACAAGTCGGTTGGCTTTC---TGTCCCACAAATCGAATTGTAATAAACCTTGAGAAGCT 86425
Query 22691 GGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCC 22750
|| || ||||| || ||| ||||| | | | ||| | |||| || |||
Sbjct 86424 GGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTCGATACTTTGCTCG 86365
Query 22751 AACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTT 22810
| || ||| || || ||||||||||||| |||||||||| ||| | ||
Sbjct 86364 ACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAACAGAG 86305
Query 22811 TCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATC 22870
||| | | | | | ||| ||| | || |||| ||| || || || | | ||
Sbjct 86304 TCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGACACCAAGGGCAATT 86245
Query 22871 GGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAA-GGATACCAATTCGAATCGAT 22929
|||| ||| |||| || || || || | ||| || || | || || ||
Sbjct 86244 GGTCTGTTCTTCATGTTAGATT-TTCTGGCAGTTTCAACTGGGTAGTAGTTTCTGTCAAT 86186
Query 22930 TGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989
| ||||||||||||| || || | || | || ||||||| |||
Sbjct 86185 GATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTTCTCAAAGTTGTA 86126
Query 22990 A-ACG------CCCGAT--TGTACAACAAA--CTTGTTGACGGCGATCGAGGCAAGATTG 23038
||| | | || | | | ||||| | || | ||| || ||||| | ||
Sbjct 86125 CCACGATTTTTCACCATCATCTTCTACAAAGGCAGGT--AAGGCAATAGAGGCCAAGTTA 86068
Query 23039 CATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACAC 23098
|| ||||| || || | | || || ||||| || ||| | || | ||
Sbjct 86067 CAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGAC 86008
Query 23099 TTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATG 23158
|| || | ||||| || | |||||| | || || || | ||| ||||| | ||||
Sbjct 86007 TTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATG 85948
Query 23159 TACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA 23218
| || || || ||||| || | ||| | || | ||||| |||| || |
Sbjct 85947 AATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTG 85888
Query 23219 ACACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGG 23276
||| | | |||| |||||||| |||||| || | |||||| || || ||
Sbjct 85887 ACAGTTTGTC--TACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTCAT 85830
Query 23277 CACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGT 23336
|||||||| ||||| | || || | || | ||| | | | |||| | ||
Sbjct 85829 CACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGT 85770
Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396
||||| || | | ||| || | ||| || ||||||| ||| ||||| || | ||
Sbjct 85769 TCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGG 85710
Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456
| | | || || || ||| |||||| | | || | ||||| || | ||| ||||
Sbjct 85709 CTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCAT 85650
Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516
|||| ||||| | ||| | |||||| || || |||||||| || || || || |||||||
Sbjct 85649 GCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGT 85590
Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576
|||| || ||||||||| | ||||| | ||| || | | ||||||||| | ||| ||
Sbjct 85589 AACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCG-TTA 85531
Query 23577 CGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635
||| || | ||||| | |||| || |||||| | || ||||| || || |||
Sbjct 85530 GTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCG 85471
Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695
| | || || |||| || || | ||||| |||||| || || || ||||| |||
Sbjct 85470 GCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCC 85411
Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755
|| || | || || | |||||| ||||||||||| | | || ||| | || ||||
Sbjct 85410 TCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAAC 85351
Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACATTAGATTGTACGTGTCGATGGC 23814
| || || || || || || || | || |||| | || || || |||||| |
Sbjct 85350 AAAGTTGGAGAAGCATGGGTGAAATACTTCA-AAGACAACATGTTATAAGTCTCGATGAC 85292
Query 23815 GGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCT 23874
|| |||| || ||||| | ||| |||||||| | ||| ||| | ||| |||||
Sbjct 85291 CTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCT 85232
Query 23875 CTCG--ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCA 23932
||| | | | | |||| || | |||| ||| || | | ||| || || || |||
Sbjct 85231 TTCGGCAACTTTA--CCGTCGATCCTCAACAAATAAGATCTCTCCATGGTCTTGAAACCA 85174
Query 23933 AAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
|| |||| |||||| || ||||| || | || ||||| || || ||
Sbjct 85173 AAGTAGTTATAGTTGAAATCACGGTCATAAACGATGGCAGAGTTTAA 85127
>seq5
Length=1057341
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| ||||| || ||||| || || || ||| | || |||||| |
Sbjct 274223 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACCATTACCTTGGAAGTTGAATCT 274282
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | | || | ||||| | || ||||||||||| | || || |||
Sbjct 274283 TCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 274342
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| || || || || ||| | || || ||| ||
Sbjct 274343 CAACAAAGATTGATCTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCCGACTAC 274402
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 274403 AACATCCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGGT 274453
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || || | || || || || ||||| | || |||||| | |||
Sbjct 899029 ATGCAAATCTTCGTCAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 898970
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | ||| ||||| || || | || || |||||
Sbjct 898969 GACACCATTGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 898910
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || |||||||| || || |||||||| || ||| || ||||| |||
Sbjct 898909 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 898850
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|||||||| ||||| ||||||||
Sbjct 898849 ATTCAAAAGGAATCTACTCTTCA 898827
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| |||||| |||| || || || || ||| | || ||||| | |||
Sbjct 899485 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACCATTACCCTTGAGGTTGAGTCTTCC 899426
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||||| | || || || ||
Sbjct 899425 GACACCATTGACAATGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 899366
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| | | || || ||||| || || || || ||| | || || || || |||
Sbjct 899365 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCTGACTACAAC 899306
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||| || ||||| |||| | ||| |||| || ||||
Sbjct 899305 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTAAGATTGAGAGGTGGTA 899257
>seq8
Length=648860
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||| |||||||||||||| |||||| ||||||| || || || ||| | || ||||||
Sbjct 616813 CAAAGATGCAAATTTTCGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAAGTTGAAT 616754
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| || |||| | || | ||||| | || |||||||| || | || || |
Sbjct 616753 CTTCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTG 616694
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||| || | | || || ||||| || || ||||| || || ||| || || |
Sbjct 616693 ACCAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACT 616634
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
| ||||| ||||| || || || | || |||| | ||| |||| || |||
Sbjct 616633 ACAACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 616581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766338707120
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