Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 134 3e-26 >seq4 Length=1221263 Score = 134 bits (148), Expect = 3e-26 Identities = 361/537 (67%), Gaps = 30/537 (6%) Strand=Plus/Minus Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACGATTTGG-CGG 101909 |||||| |||||| | |||||| | | ||||| ||| | ||| ||| |||| ||| Sbjct 1137408 ATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGAT-CAATGACAAGGACGCTTTGTTCGG 1137350 Query 101910 AACTA-ATTG-TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 | |||| ||||||||||||| |||||||| |||||||| |||||| | || || || Sbjct 1137349 TGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCCTTTGCTTC 1137290 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| | ||||| || ||| | |||| ||| | |||| ||| || ||||| || Sbjct 1137289 TATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTGACCTTCTCTAACGAGTTGAT 1137230 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087 ||| || |||||| | || ||||||||| || || |||| | | | Sbjct 1137229 CAGTAGAGATGAAGGTATGCACACCGACTTTGCCTGTTTGTTGTT-------CGCTCACT 1137177 Query 102088 TG----ATACCCCATCAAGAGAAAGGATTCTTG---AAATTGTCACTGAAGCCGTCCGAA 102140 || | | ||||| ||| |||| | | | || | || || || ||| | Sbjct 1137176 TGAACAACAAGCCATCTCCAGA---GATTGTCGAGAAGATCATTACCGAGGCTGTCTCCA 1137120 Query 102141 TTGA-ACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAG 102199 | || | || || ||| | | || |||| || || |||| |||||||| ||| Sbjct 1137119 TCGAGTCTAG-ATACTTCATCGATGCCTTGCCAGTCTCCTTGTTGGGTATGAACTGTAAG 1137061 Query 102200 TTGATGAGCCAGTACATTGAATT-TGTGGCAGATAAACTATTGGTTGAAATGGG--ACTA 102256 |||||| ||| ||| | || || ||| ||||| | | || | | | |||| || | Sbjct 1137060 TTGATGGTCCAATACGTCGAGTTCTGT-GCAGACAGATTACTTGCTTCTTTGGGTAACAA 1137002 Query 102257 GAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAAT 102316 | ||| || || |||| |||||| ||| |||||||| || |||||| | | | Sbjct 1137001 G--AAGATTTACAACGTTAACAACCCATTCGATTTCATGGAAAACATTTCCTTGGCTGGT 1136944 Query 102317 AAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCT 102373 ||||||||||| || || ||||||||| |||| || ||| || ||||||||| Sbjct 1136943 AAGACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAAAAGGCTGGTGTCATGGCT 1136887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583860530505