Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 3e-26
>seq4
Length=1221263
Score = 134 bits (148), Expect = 3e-26
Identities = 361/537 (67%), Gaps = 30/537 (6%)
Strand=Plus/Minus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACGATTTGG-CGG 101909
|||||| |||||| | |||||| | | ||||| ||| | ||| ||| |||| |||
Sbjct 1137408 ATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGAT-CAATGACAAGGACGCTTTGTTCGG 1137350
Query 101910 AACTA-ATTG-TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
| |||| ||||||||||||| |||||||| |||||||| |||||| | || || ||
Sbjct 1137349 TGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCCTTTGCTTC 1137290
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| | ||||| || ||| | |||| ||| | |||| ||| || ||||| ||
Sbjct 1137289 TATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTGACCTTCTCTAACGAGTTGAT 1137230
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
||| || |||||| | || ||||||||| || || |||| | | |
Sbjct 1137229 CAGTAGAGATGAAGGTATGCACACCGACTTTGCCTGTTTGTTGTT-------CGCTCACT 1137177
Query 102088 TG----ATACCCCATCAAGAGAAAGGATTCTTG---AAATTGTCACTGAAGCCGTCCGAA 102140
|| | | ||||| ||| |||| | | | || | || || || ||| |
Sbjct 1137176 TGAACAACAAGCCATCTCCAGA---GATTGTCGAGAAGATCATTACCGAGGCTGTCTCCA 1137120
Query 102141 TTGA-ACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAG 102199
| || | || || ||| | | || |||| || || |||| |||||||| |||
Sbjct 1137119 TCGAGTCTAG-ATACTTCATCGATGCCTTGCCAGTCTCCTTGTTGGGTATGAACTGTAAG 1137061
Query 102200 TTGATGAGCCAGTACATTGAATT-TGTGGCAGATAAACTATTGGTTGAAATGGG--ACTA 102256
|||||| ||| ||| | || || ||| ||||| | | || | | | |||| || |
Sbjct 1137060 TTGATGGTCCAATACGTCGAGTTCTGT-GCAGACAGATTACTTGCTTCTTTGGGTAACAA 1137002
Query 102257 GAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAAT 102316
| ||| || || |||| |||||| ||| |||||||| || |||||| | | |
Sbjct 1137001 G--AAGATTTACAACGTTAACAACCCATTCGATTTCATGGAAAACATTTCCTTGGCTGGT 1136944
Query 102317 AAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCT 102373
||||||||||| || || ||||||||| |||| || ||| || |||||||||
Sbjct 1136943 AAGACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAAAAGGCTGGTGTCATGGCT 1136887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583860530505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |