Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 206 2e-48 seq8 178 1e-39 >seq1 Length=2934271 Score = 206 bits (228), Expect = 2e-48 Identities = 1121/1782 (63%), Gaps = 29/1782 (2%) Strand=Plus/Minus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 || || ||||||| || | | || || | || ||||||| || ||||| || || Sbjct 87003 TCGACGGTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTC 86944 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || | ||| |||| ||||| || ||||||||||||| || | || || Sbjct 86943 TTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGGGCC 86884 Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969 | |||| || ||| |||||| |||||| || | ||||| | |||||| ||||| Sbjct 86883 TTGATATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATG 86824 Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029 || | || |||||||| | |||||||| || || || |||| || | | |||| Sbjct 86823 TCAATGATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCT 86764 Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086 || | | | || | ||||||||| || |||| | | || ||||| ||| Sbjct 86763 GGGATGTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAG 86704 Query 37087 TTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAA 37145 | ||||||| || | | | | | ||||| || | || ||| || |||| || || Sbjct 86703 TCGTTCCACA-ATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAA 86645 Query 37146 ATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATT 37205 || || | || |||||||| | || || || ||| || || || | | || || Sbjct 86644 TTCACCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTT 86585 Query 37206 ATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCT 37265 | || || |||||||| ||||| ||||| |||||||| || | | | ||||| Sbjct 86584 GTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCT 86525 Query 37266 CAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT 37325 || || || || | ||||| || | || ||| ||||| || || ||||| || Sbjct 86524 CATACCGTGCTTAGCTAATCTCTCCTTCAACAGATCCCAGTCCCACAAGTCGGTTGGCTT 86465 Query 37326 CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTC 37385 | ||||| ||| |||||| | ||||| | |||||||| | | || | Sbjct 86464 TCTGTCCCACAAATCGAATTGTAATAAACCTTGAGAAGCTGGAGATCCCTCGTAACTTGG 86405 Query 37386 ATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGT 37445 || || || | || | || | |||| ||| || | || || | || || || Sbjct 86404 GTATGGACCTTCAACCATGGCCAATTCGATACTTTGCTCGACAGCAGCGTGGTAGATGGT 86345 Query 37446 TTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAA 37505 ||||| ||||| || || ||| || || || | ||||| || | || Sbjct 86344 CTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAACAGAGTCGAAACCAACTCTGAACTT 86285 Query 37506 TATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA 37565 || || ||| |||||||| || ||||| | | || ||||| | ||| | ||||| Sbjct 86284 CATGAAAGTATCGGCCAAACCTTGGACACCAAGGGCAATTGGTCTGTTCTTCATGTTAGA 86225 Query 37566 T---CTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTT 37622 | || | | ||| | |||| || || || | || || || || || | ||| | Sbjct 86224 TTTTCTGGCAGTTTCAA---CTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTTTCT 86168 Query 37623 AACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAAT-ACGTTATT-----ATT 37676 | | | || | |||| |||||| || || | | ||| | || || Sbjct 86167 AGTAACCAACTTGGCAATTTCGTGCAACTTCTCAAAGTTGTACCACGATTTTTCACCATC 86108 Query 37677 A------ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTC 37730 | ||||| | || | |||||| | | ||||| || || ||| || Sbjct 86107 ATCTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGG 86048 Query 37731 GTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCT 37790 || | | ||| | |||||| ||| | ||| || | || | ||||| || | Sbjct 86047 GTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTTCTT 85988 Query 37791 TTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTAT 37850 ||| |||| || || ||||||| |||||| || | || | || || || || | Sbjct 85987 TTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTCAGT 85928 Query 37851 TTGAGCCTCGATAATAGATTTCCATAAACTTCTTG--CTTTAACGATCG-CTTTAAtttt 37907 ||||||||| | ||| || | ||| || |||| | ||| | | | | || | Sbjct 85927 TTGAGCCTCCAAAATGGAGTACCACAAT-TTCTGGGCCTTGACAGTTTGTCTACCACGGC 85869 Query 37908 tttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAA 37967 |||||| | |||||| || || | || |||| || | || ||| ||| Sbjct 85868 CTTCTTTCT--CGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGCTAA 85811 Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 |||||| ||| |||| | | | | ||| |||| | ||||| || | || ||| Sbjct 85810 ACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCAT 85751 Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 || ||||| || | |||||| || | || |||||| ||| |||| |||||| || || Sbjct 85750 GAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACC 85691 Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147 ||||||||| | | | || ||||| || || || |||||||| || || || | Sbjct 85690 GTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAA 85631 Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207 | | || |||||||| || | ||| || || | | || | | | ||||| || | Sbjct 85630 GGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTGAA 85571 Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267 | ||| | ||| || | ||||| || || | ||||| |||||| || |||| ||| Sbjct 85570 GACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACC 85511 Query 38268 CTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGC 38327 | |||| || || || ||| || || ||||| ||| || || || || || Sbjct 85510 AGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGC 85451 Query 38328 GCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAA 38387 || | ||| || || ||| | |||||||| ||| || ||||| || | | | || Sbjct 85450 ACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAA 85391 Query 38388 ACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447 |||| ||||||||| || |||||| || ||||| || || || ||||| ||||| | Sbjct 85390 ACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGT 85331 Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507 ||| | || ||||| ||||| || || || || | || || | | | ||||| Sbjct 85330 GAAATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACCGTG 85271 Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 | ||| | | || ||||| || ||||||||||||||| Sbjct 85270 GACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTC 85229 >seq8 Length=648860 Score = 178 bits (196), Expect = 1e-39 Identities = 1006/1588 (63%), Gaps = 75/1588 (5%) Strand=Plus/Plus Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894 ||||||||||| || || | ||| ||||||| |||||||||||||| |||| || Sbjct 31190 TAATACATTCCTGTCTTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTG 31249 Query 36895 GCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCT 36954 | ||||||||| | ||||| || | | || || ||| || ||||| | | Sbjct 31250 GACAATGTAGGATCTTTCATATAGATGTTGAGAGACTGTGATTGGTCGATAAATGGGGAT 31309 Query 36955 CTGTCGGCTGCCATTTCTAAAA-TACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013 || || || ||||| |||| | ||| ||| |||| || |||||||| |||||||| | Sbjct 31310 CTATCAGCAGCCATATCTACCACTAC-TTTCTGAGGAATTTCCCAAACTGTTTTATAAAG 31368 Query 37014 TTGTTTTATATTATCTGGTAAATC----TAAATGT-TGAATAGAACCATTATGTAACACA 37068 | || |||| || || |||| | ||| || ||||| ||||| | | | | Sbjct 31369 CTCCTTAATATATTCCGG--AATCCCGTTCAATCCCTGGATAGATCCATTGTTTGAGATT 31426 Query 37069 ATTGTATTCTTTATGTCATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGT 37126 || | | || | |||| |||| | | ||| | | | |||||||||| | Sbjct 31427 ATGAAACTTTTCACCTCATCTGTCCAGAC--TCCTAAATCAACCAAGTCTCTCAATAAAT 31484 Query 37127 GTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTAT 37186 ||||| || ||||| || || || | | | ||||| ||||| |||||| |||| Sbjct 31485 AAGGATTAACGACCTGGAACTCACCGGCAAGAGCCCTTCTCGTATAGATATTGGAAGTAA 31544 Query 37187 ATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTG 37246 ||||| | ||||| ||| || | || || || || || ||||||||| || | Sbjct 31545 GAGGTTCGAAACACTCACTATAACCGAGGATCTGGGAAGTCGACAGAGTAGGCATAGGCG 31604 Query 37247 CTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAAT 37306 | | || | ||||| |||||| | |||| | | ||| | | |||||| Sbjct 31605 CGACTAATAAAGAGTTTCTTAATCCAAACTTCTTAAGTGAGTCTTTAATTGAGGTCCAAT 31664 Query 37307 CCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTG 37366 |||| | ||| | || | | ||| | |||| |||| || | ||||| | | Sbjct 31665 CCCAAAGATCCGAAGGAGTAGTGTCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCG 31724 Query 37367 GAGAATCGTTATATGTCTCATAAGGTCCGTAAATT--TTAGCTAGTTCGCAACTAGATTC 37424 | ||| | | ||| | |||||||| ||| |||| || || | ||| | || ||| Sbjct 31725 GGGAACCTTCATAAGAATCATAAGGACCG--AATTCCTTGGCCAACTCGATAGAAGTTTC 31782 Query 37425 TAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCT 37484 | || |||| |||||| |||||||||||||| ||||| ||| | || || |||||| Sbjct 31783 CACGGCCGCATGATATATAGTTTCGAAAATTTGGATATTCAATTTCTTGGCCTCTTCGGA 31842 Query 37485 ATCGAATGCATAGCCCAATAAT-ATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543 | ||| || || | | || || || ||||| | ||| ||||| || | | ||| Sbjct 31843 AGTGAAAGC-TATTCGGAGCATCATGAATGTGTCAGCGAGACCTTGAACTCCTAAAGCTA 31901 Query 37544 TGGGTCTATGTTTCTTATTAGA--TCT-AGACGATTCTATCACTGGATAATAATTGATAT 37600 | || | |||||| || || ||| || | |||| | ||||||||| | ||| Sbjct 31902 TTGGACGATGTTTGAGGTTGGAATTCTTAGCTGTTTCTGTA---GGATAATAAGTTCTAT 31958 Query 37601 CTATTATTTTATTTAGATTTTTAACTAGTATTTTC----------GTAATTATTCTCAAC 37650 |||| | ||||| | ||| | | |||||| | |||| ||| || Sbjct 31959 CTATGACCTTATTCAAATTACGAGTAATTATTTTGCACACCGAATGCAATTTTTCAAAA- 32017 Query 37651 TTGTCGAA---CATA-AATA-CGTTATTAT-TAACAAATTTACTCAACGAAATAGATCCT 37704 ||||| || | ||| | | || | ||||| | |||| || ||| | Sbjct 32018 ---TCGAAACCCAAAGAATCTCCAGAAGATGTCACAAAGGCAGGCAACAGAACAGAAGCC 32074 Query 37705 AGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTA 37764 | ||||||||| ||| || | || | | ||| | |||||| ||| | ||| Sbjct 32075 AAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACATAAATTG 32134 Query 37765 CTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATAT 37824 ||| |||| || |||||||| |||| || ||||| |||||| |||||| || Sbjct 32135 GAAGATTTAATAGTCCCCAAATTCTTTTGGTTCGATTTCAGATTACACAGATCTTTGTAG 32194 Query 37825 AGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTT 37884 || ||| | || || ||| || || || || || | || | ||| || |||| Sbjct 32195 AGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCACAAT-TTCT- 32252 Query 37885 GCTTTAACGATCGCTTTAAtttttttCTTTG-TTTC-----GTATTCTATATATAATTTG 37938 || ||| | |||| |||||| |||| || ||| |||| || | Sbjct 32253 --------GA--GCTCTGATTTGAGTCTTTGCTTTCCCCAGGTTTTC---ATATTTTTCG 32299 Query 37939 TTAAAATC-----ATTCCC--CCATACATC--GCATAATCCTGGACATTCGCATGGACAC 37989 | || | | ||||| ||||| | | |||| |||||| ||| ||| | Sbjct 32300 TAAAGAGCTTCAAATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAG 32359 Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049 | ||| ||| || || || || | || ||||||||||||||| ||||| || Sbjct 32360 AAGAGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAAC 32419 Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109 || || ||||| | | |||| ||| || ||||| ||| || | | | | Sbjct 32420 AGAGGGAACAAATCCCTAGCTCTAATTTCCTCTTTCCCATGATTTTTACGGATCCCAATG 32479 Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169 ||||| || |||||| ||||||||||| | ||| | | || || || ||||| ||| Sbjct 32480 AAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTA 32539 Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229 | |||||| |||| | |||||| | | || || | | ||| ||||| || | || Sbjct 32540 TTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATC 32599 Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289 |||||||| | || || |||| || || || | || | | || ||||| || Sbjct 32600 CCATTAGAGGTCCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGAATA 32659 Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349 || ||| || || ||||||| ||| || || | ||||| | || | ||||||||| Sbjct 32660 TGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAA 32719 Query 38350 ATACCTTCTATACTGTCATCCTTTATTG 38377 || || || || |||||||| |||| Sbjct 32720 ATCCCCTCGATGGAATCATCCTTCATTG 32747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524735577840