Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 206 2e-48
seq8 178 1e-39
>seq1
Length=2934271
Score = 206 bits (228), Expect = 2e-48
Identities = 1121/1782 (63%), Gaps = 29/1782 (2%)
Strand=Plus/Minus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| || ||||||| || | | || || | || ||||||| || ||||| || ||
Sbjct 87003 TCGACGGTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTC 86944
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| | ||| |||| ||||| || ||||||||||||| || | || ||
Sbjct 86943 TTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGGGCC 86884
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
| |||| || ||| |||||| |||||| || | ||||| | |||||| |||||
Sbjct 86883 TTGATATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATG 86824
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
|| | || |||||||| | |||||||| || || || |||| || | | ||||
Sbjct 86823 TCAATGATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCT 86764
Query 37030 GGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086
|| | | | || | ||||||||| || |||| | | || ||||| |||
Sbjct 86763 GGGATGTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAG 86704
Query 37087 TTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGGTGTGGATTTACAACCTGAAA 37145
| ||||||| || | | | | | ||||| || | || ||| || |||| || ||
Sbjct 86703 TCGTTCCACA-ATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAA 86645
Query 37146 ATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATT 37205
|| || | || |||||||| | || || || ||| || || || | | || ||
Sbjct 86644 TTCACCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTT 86585
Query 37206 ATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCT 37265
| || || |||||||| ||||| ||||| |||||||| || | | | |||||
Sbjct 86584 GTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCT 86525
Query 37266 CAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTT 37325
|| || || || | ||||| || | || ||| ||||| || || ||||| ||
Sbjct 86524 CATACCGTGCTTAGCTAATCTCTCCTTCAACAGATCCCAGTCCCACAAGTCGGTTGGCTT 86465
Query 37326 CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTC 37385
| ||||| ||| |||||| | ||||| | |||||||| | | || |
Sbjct 86464 TCTGTCCCACAAATCGAATTGTAATAAACCTTGAGAAGCTGGAGATCCCTCGTAACTTGG 86405
Query 37386 ATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGT 37445
|| || || | || | || | |||| ||| || | || || | || || ||
Sbjct 86404 GTATGGACCTTCAACCATGGCCAATTCGATACTTTGCTCGACAGCAGCGTGGTAGATGGT 86345
Query 37446 TTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAA 37505
||||| ||||| || || ||| || || || | ||||| || | ||
Sbjct 86344 CTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAACAGAGTCGAAACCAACTCTGAACTT 86285
Query 37506 TATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGA 37565
|| || ||| |||||||| || ||||| | | || ||||| | ||| | |||||
Sbjct 86284 CATGAAAGTATCGGCCAAACCTTGGACACCAAGGGCAATTGGTCTGTTCTTCATGTTAGA 86225
Query 37566 T---CTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTT 37622
| || | | ||| | |||| || || || | || || || || || | ||| |
Sbjct 86224 TTTTCTGGCAGTTTCAA---CTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTTTCT 86168
Query 37623 AACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAAT-ACGTTATT-----ATT 37676
| | | || | |||| |||||| || || | | ||| | || ||
Sbjct 86167 AGTAACCAACTTGGCAATTTCGTGCAACTTCTCAAAGTTGTACCACGATTTTTCACCATC 86108
Query 37677 A------ACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTC 37730
| ||||| | || | |||||| | | ||||| || || ||| ||
Sbjct 86107 ATCTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGG 86048
Query 37731 GTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCT 37790
|| | | ||| | |||||| ||| | ||| || | || | ||||| || |
Sbjct 86047 GTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTTCTT 85988
Query 37791 TTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTAT 37850
||| |||| || || ||||||| |||||| || | || | || || || || |
Sbjct 85987 TTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTCAGT 85928
Query 37851 TTGAGCCTCGATAATAGATTTCCATAAACTTCTTG--CTTTAACGATCG-CTTTAAtttt 37907
||||||||| | ||| || | ||| || |||| | ||| | | | | || |
Sbjct 85927 TTGAGCCTCCAAAATGGAGTACCACAAT-TTCTGGGCCTTGACAGTTTGTCTACCACGGC 85869
Query 37908 tttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAA 37967
|||||| | |||||| || || | || |||| || | || ||| |||
Sbjct 85868 CTTCTTTCT--CGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGCTAA 85811
Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027
|||||| ||| |||| | | | | ||| |||| | ||||| || | || |||
Sbjct 85810 ACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCAT 85751
Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087
|| ||||| || | |||||| || | || |||||| ||| |||| |||||| || ||
Sbjct 85750 GAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACC 85691
Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147
||||||||| | | | || ||||| || || || |||||||| || || || |
Sbjct 85690 GTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAA 85631
Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207
| | || |||||||| || | ||| || || | | || | | | ||||| || |
Sbjct 85630 GGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTTGAA 85571
Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267
| ||| | ||| || | ||||| || || | ||||| |||||| || |||| |||
Sbjct 85570 GACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACC 85511
Query 38268 CTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGC 38327
| |||| || || || ||| || || ||||| ||| || || || || ||
Sbjct 85510 AGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGC 85451
Query 38328 GCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAA 38387
|| | ||| || || ||| | |||||||| ||| || ||||| || | | | ||
Sbjct 85450 ACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAA 85391
Query 38388 ACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTAT 38447
|||| ||||||||| || |||||| || ||||| || || || ||||| ||||| |
Sbjct 85390 ACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGT 85331
Query 38448 GAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTG 38507
||| | || ||||| ||||| || || || || | || || | | | |||||
Sbjct 85330 GAAATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACCGTG 85271
Query 38508 AATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
| ||| | | || ||||| || |||||||||||||||
Sbjct 85270 GACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTC 85229
>seq8
Length=648860
Score = 178 bits (196), Expect = 1e-39
Identities = 1006/1588 (63%), Gaps = 75/1588 (5%)
Strand=Plus/Plus
Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894
||||||||||| || || | ||| ||||||| |||||||||||||| |||| ||
Sbjct 31190 TAATACATTCCTGTCTTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTG 31249
Query 36895 GCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCT 36954
| ||||||||| | ||||| || | | || || ||| || ||||| | |
Sbjct 31250 GACAATGTAGGATCTTTCATATAGATGTTGAGAGACTGTGATTGGTCGATAAATGGGGAT 31309
Query 36955 CTGTCGGCTGCCATTTCTAAAA-TACATTTTTGAGATATCTCCCAAACCGTTTTATATAT 37013
|| || || ||||| |||| | ||| ||| |||| || |||||||| |||||||| |
Sbjct 31310 CTATCAGCAGCCATATCTACCACTAC-TTTCTGAGGAATTTCCCAAACTGTTTTATAAAG 31368
Query 37014 TTGTTTTATATTATCTGGTAAATC----TAAATGT-TGAATAGAACCATTATGTAACACA 37068
| || |||| || || |||| | ||| || ||||| ||||| | | | |
Sbjct 31369 CTCCTTAATATATTCCGG--AATCCCGTTCAATCCCTGGATAGATCCATTGTTTGAGATT 31426
Query 37069 ATTGTATTCTTTATGTCATTATTCCACATATTTCTACTT--ATTAGTTCTCTCAATAGGT 37126
|| | | || | |||| |||| | | ||| | | | |||||||||| |
Sbjct 31427 ATGAAACTTTTCACCTCATCTGTCCAGAC--TCCTAAATCAACCAAGTCTCTCAATAAAT 31484
Query 37127 GTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTAT 37186
||||| || ||||| || || || | | | ||||| ||||| |||||| ||||
Sbjct 31485 AAGGATTAACGACCTGGAACTCACCGGCAAGAGCCCTTCTCGTATAGATATTGGAAGTAA 31544
Query 37187 ATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTG 37246
||||| | ||||| ||| || | || || || || || ||||||||| || |
Sbjct 31545 GAGGTTCGAAACACTCACTATAACCGAGGATCTGGGAAGTCGACAGAGTAGGCATAGGCG 31604
Query 37247 CTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAAT 37306
| | || | ||||| |||||| | |||| | | ||| | | ||||||
Sbjct 31605 CGACTAATAAAGAGTTTCTTAATCCAAACTTCTTAAGTGAGTCTTTAATTGAGGTCCAAT 31664
Query 37307 CCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTG 37366
|||| | ||| | || | | ||| | |||| |||| || | ||||| | |
Sbjct 31665 CCCAAAGATCCGAAGGAGTAGTGTCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCG 31724
Query 37367 GAGAATCGTTATATGTCTCATAAGGTCCGTAAATT--TTAGCTAGTTCGCAACTAGATTC 37424
| ||| | | ||| | |||||||| ||| |||| || || | ||| | || |||
Sbjct 31725 GGGAACCTTCATAAGAATCATAAGGACCG--AATTCCTTGGCCAACTCGATAGAAGTTTC 31782
Query 37425 TAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCT 37484
| || |||| |||||| |||||||||||||| ||||| ||| | || || ||||||
Sbjct 31783 CACGGCCGCATGATATATAGTTTCGAAAATTTGGATATTCAATTTCTTGGCCTCTTCGGA 31842
Query 37485 ATCGAATGCATAGCCCAATAAT-ATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543
| ||| || || | | || || || ||||| | ||| ||||| || | | |||
Sbjct 31843 AGTGAAAGC-TATTCGGAGCATCATGAATGTGTCAGCGAGACCTTGAACTCCTAAAGCTA 31901
Query 37544 TGGGTCTATGTTTCTTATTAGA--TCT-AGACGATTCTATCACTGGATAATAATTGATAT 37600
| || | |||||| || || ||| || | |||| | ||||||||| | |||
Sbjct 31902 TTGGACGATGTTTGAGGTTGGAATTCTTAGCTGTTTCTGTA---GGATAATAAGTTCTAT 31958
Query 37601 CTATTATTTTATTTAGATTTTTAACTAGTATTTTC----------GTAATTATTCTCAAC 37650
|||| | ||||| | ||| | | |||||| | |||| ||| ||
Sbjct 31959 CTATGACCTTATTCAAATTACGAGTAATTATTTTGCACACCGAATGCAATTTTTCAAAA- 32017
Query 37651 TTGTCGAA---CATA-AATA-CGTTATTAT-TAACAAATTTACTCAACGAAATAGATCCT 37704
||||| || | ||| | | || | ||||| | |||| || ||| |
Sbjct 32018 ---TCGAAACCCAAAGAATCTCCAGAAGATGTCACAAAGGCAGGCAACAGAACAGAAGCC 32074
Query 37705 AGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTA 37764
| ||||||||| ||| || | || | | ||| | |||||| ||| | |||
Sbjct 32075 AAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACATAAATTG 32134
Query 37765 CTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATAT 37824
||| |||| || |||||||| |||| || ||||| |||||| |||||| ||
Sbjct 32135 GAAGATTTAATAGTCCCCAAATTCTTTTGGTTCGATTTCAGATTACACAGATCTTTGTAG 32194
Query 37825 AGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTT 37884
|| ||| | || || ||| || || || || || | || | ||| || ||||
Sbjct 32195 AGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCACAAT-TTCT- 32252
Query 37885 GCTTTAACGATCGCTTTAAtttttttCTTTG-TTTC-----GTATTCTATATATAATTTG 37938
|| ||| | |||| |||||| |||| || ||| |||| || |
Sbjct 32253 --------GA--GCTCTGATTTGAGTCTTTGCTTTCCCCAGGTTTTC---ATATTTTTCG 32299
Query 37939 TTAAAATC-----ATTCCC--CCATACATC--GCATAATCCTGGACATTCGCATGGACAC 37989
| || | | ||||| ||||| | | |||| |||||| ||| ||| |
Sbjct 32300 TAAAGAGCTTCAAATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAG 32359
Query 37990 ATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAAT 38049
| ||| ||| || || || || | || ||||||||||||||| ||||| ||
Sbjct 32360 AAGAGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAAC 32419
Query 38050 GCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGA 38109
|| || ||||| | | |||| ||| || ||||| ||| || | | | |
Sbjct 32420 AGAGGGAACAAATCCCTAGCTCTAATTTCCTCTTTCCCATGATTTTTACGGATCCCAATG 32479
Query 38110 AAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTA 38169
||||| || |||||| ||||||||||| | ||| | | || || || ||||| |||
Sbjct 32480 AAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTA 32539
Query 38170 TCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATA 38229
| |||||| |||| | |||||| | | || || | | ||| ||||| || | ||
Sbjct 32540 TTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATC 32599
Query 38230 CCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATC 38289
|||||||| | || || |||| || || || | || | | || ||||| ||
Sbjct 32600 CCATTAGAGGTCCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGAATA 32659
Query 38290 GACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAAT 38349
|| ||| || || ||||||| ||| || || | ||||| | || | |||||||||
Sbjct 32660 TGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAA 32719
Query 38350 ATACCTTCTATACTGTCATCCTTTATTG 38377
|| || || || |||||||| ||||
Sbjct 32720 ATCCCCTCGATGGAATCATCCTTCATTG 32747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524735577840
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