Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5 113 4e-20
>seq5
Length=1057341
Score = 113 bits (124), Expect = 4e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612
|| || ||||||| ||||| || ||||||||||| || || || || || |||
Sbjct 899274 AAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCGTCC 899333
Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672
|| | || ||||||||| | |||| | ||| ||||| ||||| || ||||| |||||
Sbjct 899334 TCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC- 899392
Query 139673 GTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGT 139731
||| | || | ||| | | || | ||||||| | ||| ||||||| ||| | ||
Sbjct 899393 TTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCAACCTCAAGGGTAATGGT 899452
Query 139732 CTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| |||||||| || || ||||| |||||||||
Sbjct 899453 CTTACCGGTCAAAGTCTTGACGAAAATTTGCATA 899486
Score = 100 bits (110), Expect = 3e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| || |||| ||| | ||| |||||||||| ||||| || ||||||||||| |||||
Sbjct 898800 TGACCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCA 898859
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|| || || ||||| | || |||||||| | |||| | ||| || || ||
Sbjct 898860 GACAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 898919
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| || || |||||||| ||| |||| | || | | || | ||||||| || ||
Sbjct 898920 GGAATACCCTCTTTGTC-TTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTC 898978
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| || | || | ||||| || || || ||||| ||||| |||||||||
Sbjct 898979 AACTTCCAAAGTGATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCATA 899030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063931791200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |