Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 >seq4 Length=1221263 Score = 105 bits (116), Expect = 6e-18 Identities = 236/350 (67%), Gaps = 6/350 (2%) Strand=Plus/Plus Query 13869 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13928 ||||| ||||| || || | || ||||||||||| || | ||||| || || || Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250 Query 13929 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAG 13988 || |||||||| || |||| || || ||||| || || | |||||| || || ||| Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310 Query 13989 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTC 14048 || || || ||||| |||||||| || | |||| || || ||| | || | |||| Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370 Query 14049 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14108 |||||| | |||||| || | || | || ||| | || || || || ||| Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430 Query 14109 TTAAATAAATATTC--CTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGCTA 14165 || || || | || |||| |||| | | |||| ||||| || ||||| | || Sbjct 1137431 TTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG--ATGTAGGTGTCAATCAACAAAGAG 1137487 Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215 || | |||||||| ||||| ||||| || || ||||| || || || Sbjct 1137488 TAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACA 1137537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727934037400