Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 4e-21
>seq4
Length=1221263
Score = 116 bits (128), Expect = 4e-21
Identities = 294/439 (67%), Gaps = 10/439 (2%)
Strand=Plus/Plus
Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716
||||| ||||| || || | || ||||||||||| || | ||||| || || ||
Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250
Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776
|| |||||||| || |||| || || ||||| || || | ||| || || || |||
Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310
Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-- 13834
|| || || ||||| |||||||| || | | || || || ||| | || | ||||
Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370
Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894
||| |||||| | |||||| || | || | || ||| | || || ||||| |
Sbjct 1137371 TTG--ATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGG 1137428
Query 13895 CATTGAATAA-ATGT-TCCTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGC 13951
||||||| || | || |||| |||| | | |||| ||||| || ||||| | ||
Sbjct 1137429 CATTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG--ATGTAGGTGTCAATCAACAAAG 1137485
Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14011
|| | |||||||| ||||| || || || || ||||| || ||||| | ||
Sbjct 1137486 AGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTT 1137545
Query 14012 CTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
| | ||| ||||| | | || | || ||||||| || || |||||||| |||
Sbjct 1137546 CAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAG 1137605
Query 14072 TAGCTGCAAAAAATGCCAA 14090
|| || || || |||||
Sbjct 1137606 AGGCGGCGAAGAAGGCCAA 1137624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588734194040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |