Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4 116 4e-21 >seq4 Length=1221263 Score = 116 bits (128), Expect = 4e-21 Identities = 294/439 (67%), Gaps = 10/439 (2%) Strand=Plus/Plus Query 13657 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 13716 ||||| ||||| || || | || ||||||||||| || | ||||| || || || Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250 Query 13717 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 13776 || |||||||| || |||| || || ||||| || || | ||| || || || ||| Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310 Query 13777 AATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-- 13834 || || || ||||| |||||||| || | | || || || ||| | || | |||| Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370 Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894 ||| |||||| | |||||| || | || | || ||| | || || ||||| | Sbjct 1137371 TTG--ATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGG 1137428 Query 13895 CATTGAATAA-ATGT-TCCTTCTCTTTAG-TACTTGAAATGTATGTATCAATAAGTAAGC 13951 ||||||| || | || |||| |||| | | |||| ||||| || ||||| | || Sbjct 1137429 CATTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG--ATGTAGGTGTCAATCAACAAAG 1137485 Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14011 || | |||||||| ||||| || || || || ||||| || ||||| | || Sbjct 1137486 AGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTT 1137545 Query 14012 CTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | | ||| ||||| | | || | || ||||||| || || |||||||| ||| Sbjct 1137546 CAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAG 1137605 Query 14072 TAGCTGCAAAAAATGCCAA 14090 || || || || ||||| Sbjct 1137606 AGGCGGCGAAGAAGGCCAA 1137624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588734194040