Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 221 2e-52 seq4 205 1e-47 seq8 152 7e-32 >seq1 Length=2934271 Score = 221 bits (244), Expect = 2e-52 Identities = 765/1177 (65%), Gaps = 30/1177 (3%) Strand=Plus/Minus Query 71675 CATCTATTACAAA--CACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATT 71732 ||||| |||||| || || ||||||| ||| |||| |||||||||||| || | Sbjct 86108 CATCTTCTACAAAGGCAGGT--AAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTC 86051 Query 71733 AGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 71792 || || | ||||| | ||| ||| || | ||| | ||||||| | || || || Sbjct 86050 AGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTT 85991 Query 71793 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTC 71852 | ||| || |||| |||||||| ||||| || || | || || |||||||| || || Sbjct 85990 CTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTC 85931 Query 71853 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATC 71911 | | |||| || | ||| | | ||| | | ||||| | | | ||| | Sbjct 85930 AGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTGACAGTTTGTCTACCACG 85871 Query 71912 TCTTTTCTCTTTCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTC 71969 | || || | ||||||| ||| | || | | |||||| || || || | | | | Sbjct 85870 GCCTT-CTTTCTCGTATTTCTCGTACA-AAGCAAT-GAACTCATCACCGTAAACCTCGGC 85814 Query 71970 TAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGT 72027 ||| || ||| |||||| ||| | | ||| | ||| ||| | || ||| |||| | Sbjct 85813 TAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGT--TCTTTTCGACTCTT 85756 Query 72028 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 72087 | ||| || | ||| || ||||| | |||| || | |||||||| |||| || || Sbjct 85755 TGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCC 85696 Query 72088 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 72147 || || ||||||| | | || | ||| | | || || | |||||| || || | | Sbjct 85695 TTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATG 85636 Query 72148 TATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 72207 || | ||| | | || || | ||||| || || || || | ||| | ||| ||||| Sbjct 85635 TACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTG 85576 Query 72208 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 72267 || | ||||| | ||||||||||||||| ||||| | ||| || || |||| || || Sbjct 85575 TTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAA 85516 Query 72268 CTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 72327 ||| |||| | ||| ||| || | ||| || || || || | || || || Sbjct 85515 GAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATC 85456 Query 72328 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 72387 || || || ||| || || ||||| || || || ||| ||| ||| ||||| || Sbjct 85455 AAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACA 85396 Query 72388 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 72447 || ||||| ||||||||| | | ||| || || || || || || |||||||| Sbjct 85395 AGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCA 85336 Query 72448 TGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT-AGCT----GATTCTATAT 72502 || || || | || ||||| | || || ||||| || | || ||| ||| Sbjct 85335 TGGGTGAAATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCA 85276 Query 72503 CCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCT 72562 || || | || | ||||| | ||| || ||| || |||||||| | | | Sbjct 85275 CC-----GTGGACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTCGGCAACTT 85221 Query 72563 TGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 72620 | | || ||||||| || ||| | |||| || || |||||||| ||||| || Sbjct 85220 TACCGTCGATCCTCAACAAATAAGATCTCTCCATGGTCTTGAAACCAAAGTAGTTATAGT 85161 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTAT 72680 ||||| || || || |||| || | || || | | ||| || | || || Sbjct 85160 TGAAA--TCACGGTCATAAACGATGGCAGAGTTTAACTCATCGGCATGAGCCATGACAAT 85103 Query 72681 ATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGT 72739 || ||| | | ||| || | || ||||||||| ||||| || || || ||||||| Sbjct 85102 AT-CATAGGTTTCCTTGGAGACCATAGGAGAATGTAAACCATTCTTTGGGTTGACATAGT 85044 Query 72740 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 72799 || ||||| | | || ||||| || ||| | |||| || || | || || | Sbjct 85043 TGTATAAAGAGGCAACGACATCACTGAAACATTTGGTGGTTTGTTTATGCAAGTTAGAGA 84984 Query 72800 CGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 ||| ||||||||||||| ||||| || ||||| || Sbjct 84983 TGGCGATTCTGGCGGCTAAGATGGCGTAGTCTGGGTG 84947 >seq4 Length=1221263 Score = 205 bits (226), Expect = 1e-47 Identities = 589/896 (66%), Gaps = 30/896 (3%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | || ||||| || || ||||| || |||| || || ||| Sbjct 1136903 TTTTGGTAATCGGAGACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAGGAAATGTTT 1136962 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||||||||| || || ||| |||| || ||||| || || ||||| || || Sbjct 1136963 TCCATGAAATCGAATGGGTTGTTAACGTTGTAAATCTTCTTGTTACCCAAAGAAGCAAGT 1137022 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 ||||| ||||| ||| || | ||| ||||| | ||| ||||| || | | Sbjct 1137023 AATCTGTCTGCACAGAACTCGACGTATTGGACCATCAACTTACAGTTCATACCCAACAAG 1137082 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGT-TCAATAGAGACCGCGTCTGTTATAA 42011 ||||| | || || | | ||| | ||| | || || ||||| || || || || Sbjct 1137083 GAGACTGGCA-AGGCATCG-ATGAAGTATCTAGACTCGATGGAGACAGCCTCGGTAAT-- 1137138 Query 42012 TAGATCTTACTGTTTCTTCACTCGGTGGATACAA-TAAATGTTTAA--------ACATCA 42062 |||||| || || || |||| | | |||| || ||| || Sbjct 1137139 --GATCTTC-----TCGACAATCTCTGGAGATGGCTTGTTGTTCAAGTGAGCGAACAACA 1137191 Query 42063 AACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGA 42122 |||| || || ||| ||||| ||| ||||||||||| || || ||||| || || || | Sbjct 1137192 AACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTCA 1137251 Query 42123 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGA 42182 || ||||||| || | ||| || | ||| || ||||| ||||| || ||| |||| Sbjct 1137252 AACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAGA 1137311 Query 42183 AGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC---ATAACCGGCACTGTCAT 42239 |||| ||||| || || |||||||||| | |||||| || || || | |||||| Sbjct 1137312 AGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCAT 1137371 Query 42240 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 42299 ||||| | |||||| |||||||||| || | ||| || || || || ||||||| Sbjct 1137372 TGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCAT 1137431 Query 42300 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACA 42359 | || | ||| ||| || ||| || | || || || ||||| | | || Sbjct 1137432 TGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAAGAGTAAG 1137491 Query 42360 TTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 | || || || ||||| || || || || || ||||||||||| | || | || Sbjct 1137492 TCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTCAGGAA 1137551 Query 42420 CCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 || || || | | | || ||| | || || ||||| || || |||||| ||| | Sbjct 1137552 GTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGAGGCGG 1137611 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTT-AATT---TATTC 42535 | || || ||||| || || |||||| | |||| | ||| || | | ||| Sbjct 1137612 CGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGT-TGTCGTTCAACTTGGTCTTC 1137670 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 || ||| ||||||| ||| || || | || || | ||||| || || || || ||| Sbjct 1137671 CAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCC 1137730 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATT 42651 || || ||||| | |||||| || || || | |||||||| | || ||||| || Sbjct 1137731 TTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCTCTT 1137786 >seq8 Length=648860 Score = 152 bits (168), Expect = 7e-32 Identities = 453/690 (66%), Gaps = 18/690 (3%) Strand=Plus/Plus Query 71700 AACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGT 71759 |||||| |||| |||||| ||||| ||| || |||| | ||||| | ||| ||| Sbjct 32065 AACAGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACA 32124 Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG-TTACACG 71818 || | ||| | | || || || || ||||| | ||| || | ||| | |||||| Sbjct 32125 ACATAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTT-CGATTTCAGATTACACA 32183 Query 71819 CATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 71878 ||| || || || ||||| |||||||| || || ||||| | ||||| || || || Sbjct 32184 GATCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACC 32243 Query 71879 AGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTC----TTTCGTATTGTGTA 71934 | | |||| | ||| | |||| |||| | | |||| |||| | Sbjct 32244 ACAATTTCTGAGCTCTGATTTGAGTCTTTG----CTTTCCCCAGGTTTTCATATTTTTCG 32299 Query 71935 TATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACAC 71994 || | ||| || || ||| ||| | || ||| || ||| |||||| ||| | Sbjct 32300 TAAAGAGCTTCAAATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAG 32359 Query 71995 ATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCA-AAG 72053 | | |||| | |||| | |||| ||||||||| | |||||| | ||| || Sbjct 32360 AAGAGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAAC 32419 Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG-ATCG- 72111 || || | ||| || | |||| ||||| || || || |||||| | ||| Sbjct 32420 AGAGGGAACAA-ATCCCTAGCTCTAATTTCCTCTTTCCC---ATGATTTTTACGGATCCC 32475 Query 72112 -AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCG 72170 | ||| | | ||||||| |||||| |||||||| || | ||| ||| | || || | Sbjct 32476 AATGAAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCT 32535 Query 72171 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 72230 || || ||||| ||||||| ||||| || | || || | ||||||||||| || || Sbjct 32536 CTTATTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGAT 32595 Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCT 72290 ||| ||||| || | ||||| || || ||||| | || ||| | | | |||||| Sbjct 32596 AATCCCATTAGAGGTCCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTG 32655 Query 72291 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 72350 ||| | || || || ||||| |||||||||| | ||||| || | |||||| Sbjct 32656 AATATGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATC 32715 Query 72351 ATAGATGCCCTCTATACTATCATCCATCAT 72380 | | || ||||| || ||||||| |||| Sbjct 32716 AAAAATCCCCTCGATGGAATCATCCTTCAT 32745 Score = 100 bits (110), Expect = 4e-16 Identities = 173/246 (70%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 70795 TCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTT 70854 |||| || || ||||| | || || || |||| || || || || ||||| ||||| Sbjct 31145 TCCACAGTGAATTGAATAGCAGCCGAAGCTGCTTGAGTCCGAAGGTAATACATTCCTGTC 31204 Query 70855 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCG 70914 || | || ||||||| ||||||||||||||||| | ||||| | ||||||| Sbjct 31205 TTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTGGACAATGTAGGATCT 31264 Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974 || | || || | ||||| ||| ||||| || | || || |||||||| Sbjct 31265 TTCATATAGATGTTGAGAGACTGTGATTGGTCGATAAATGGGGATCTATCAGCAGCCATA 31324 Query 70975 TTTATGATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTT 71032 | || | | |||| || ||||||||||||| |||||||||| ||| |||||||| || Sbjct 31325 TCTACCA-CTACTTTCTGAGGAATTTCCCAAACTGTTTTATAAAGCTC-CTTAATATATT 31382 Query 71033 CTGGAA 71038 | |||| Sbjct 31383 CCGGAA 31388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139107718360