Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5 120 3e-22 >seq5 Length=1057341 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 || ||||||| ||| | ||| ||||| |||| |||||||| ||||| ||||||||||| Sbjct 898800 TGACCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCA 898859 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || || || ||||| | ||| |||||||| | |||| | ||| || || || Sbjct 898860 GACAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGT 898919 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || || |||||||| |||||| || | | || | ||||| | || ||| Sbjct 898920 GGAATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCA 898979 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| | ||| | ||||| || || || ||||| ||||| ||||||||| Sbjct 898980 ACTTCCAAAGTGATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCATA 899030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014330285520