Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4 176 7e-39
>seq4
Length=1221263
Score = 176 bits (194), Expect = 7e-39
Identities = 596/904 (66%), Gaps = 37/904 (4%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
|||| || |||| ||| || || || ||| |||||||||| ||||| |||| || || |
Sbjct 1137773 TGTTCCCAATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCT 1137714
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| ||| | || | ||||| | || ||| |||| |||| |
Sbjct 1137713 GGACCGCCGAGGAGATTGACTTAAGTAAGGATATCATTGACTGGAAGACCAAGTTGAACG 1137654
Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| | ||| || | || || || || | ||||||||||||| |||| ||| || || ||
Sbjct 1137653 ACAACGAGAGATATTTCATCTC-CAGAGTTTTGGCCTTCTTCGCCGCCTCTGACGGTATT 1137595
Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGT 125232
|||||||| || | ||||| | |||||| || ||| | | |||| || || ||
Sbjct 1137594 GTCAACGAGAACTTGGTTGAGA-ACTTCTCTGCCGAGGTTCAAC-TTCCTGAACTGAAGT 1137537
Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292
| || ||||| |||||||| ||||| |||||| | ||||| || | |||||| |||
Sbjct 1137536 GTTTCTACGGTTTCCAAATTATGATGGAGAACATCCACTCTGAGACTTACTCTTTGTTGA 1137477
Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACAC 125350
|||||| ||||| |||| ||| | || | || | | || || || ||||| ||
Sbjct 1137476 TTGACACCTACATCAAGGATC--CAAAGGAAGCTGACTTCTTGTTCAATGCCATCGAGAC 1137419
Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410
| || | ||| | ||||| | |||| | | |||||| ||||| | | |
Sbjct 1137418 TATTCCATGTATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAATGACAAGGACGC 1137359
Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470
|| || || || ||| |||| || || || ||||| || || |||||||| |||
Sbjct 1137358 TTTGTTCGGTGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTC 1137299
Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530
||||| | ||||| ||| | |||||| | || | ||||| || |||| | |||
Sbjct 1137298 CTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTGACCTTCTCTAA 1137239
Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGC-A 125589
|||||| || | |||| || || | ||| ||||||||| | | || |||||
Sbjct 1137238 CGAGTTGATCAGTAGAGATGAAGGTATGCACACCGACTTTGCCTGTTTGTTG-TTCGCTC 1137180
Query 125590 ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATG 125649
||| || | || || ||||| ||| ||| || || | ||||| |
Sbjct 1137179 ACT---TGAACAACAAG-CCATCTCCAGAGAT-----TGTCGAGAAGATCATTACCGAGG 1137129
Query 125650 CCGTGAGGATAGA-ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATG 125708
| || || || | ||| | | | ||| || | || ||| | || | || |||
Sbjct 1137128 CTGTCTCCATCGAGTCTAGA-TACTTCATCGATGCCTTGCCAGTCTCCTTGTTGGGTATG 1137070
Query 125709 AACTGCAAGCTAATGTGCGAGTACATAGAGTT-TGTGGCAGATCGTCTACTGTACGAGTT 125767
||||| ||| | ||| | | ||| | ||||| ||| ||||| | |||| | | ||
Sbjct 1137069 AACTGTAAGTTGATGGTCCAATACGTCGAGTTCTGT-GCAGACAGATTACT-TGC---TT 1137015
Query 125768 GATTGG----CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT 125823
|||| | ||||||||||||| || || || || ||||||||| | ||| |
Sbjct 1137014 CTTTGGGTAACAAGAAGATTTACAACGTTAACAACCCATTCGATTTCATGGAAAACATTT 1136955
Query 125824 CACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGG 125881
| | | |||||||||||||| |||||||||| ||| ||| ||| ||| ||| ||
Sbjct 1136954 CCTTGGCTGGTAAGACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAAAAGGCT--GG 1136897
Query 125882 TGTC 125885
||||
Sbjct 1136896 TGTC 1136893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059098104360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |