Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 176 7e-39 >seq4 Length=1221263 Score = 176 bits (194), Expect = 7e-39 Identities = 596/904 (66%), Gaps = 37/904 (4%) Strand=Plus/Minus Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055 |||| || |||| ||| || || || ||| |||||||||| ||||| |||| || || | Sbjct 1137773 TGTTCCCAATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCT 1137714 Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115 |||| | ||| ||| | || | ||||| | || ||| |||| |||| | Sbjct 1137713 GGACCGCCGAGGAGATTGACTTAAGTAAGGATATCATTGACTGGAAGACCAAGTTGAACG 1137654 Query 125116 AAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 | | ||| || | || || || || | ||||||||||||| |||| ||| || || || Sbjct 1137653 ACAACGAGAGATATTTCATCTC-CAGAGTTTTGGCCTTCTTCGCCGCCTCTGACGGTATT 1137595 Query 125175 GTCAACGACAA-TCTGTTGACACGATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGT 125232 |||||||| || | ||||| | |||||| || ||| | | |||| || || || Sbjct 1137594 GTCAACGAGAACTTGGTTGAGA-ACTTCTCTGCCGAGGTTCAAC-TTCCTGAACTGAAGT 1137537 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || ||||| |||||||| ||||| |||||| | ||||| || | |||||| ||| Sbjct 1137536 GTTTCTACGGTTTCCAAATTATGATGGAGAACATCCACTCTGAGACTTACTCTTTGTTGA 1137477 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTCTTTAACGCAATCGACAC 125350 |||||| ||||| |||| ||| | || | || | | || || || ||||| || Sbjct 1137476 TTGACACCTACATCAAGGATC--CAAAGGAAGCTGACTTCTTGTTCAATGCCATCGAGAC 1137419 Query 125351 GGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTC 125410 | || | ||| | ||||| | |||| | | |||||| ||||| | | | Sbjct 1137418 TATTCCATGTATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAATGACAAGGACGC 1137359 Query 125411 TTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAG 125470 || || || || ||| |||| || || || ||||| || || |||||||| ||| Sbjct 1137358 TTTGTTCGGTGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTC 1137299 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 ||||| | ||||| ||| | |||||| | || | ||||| || |||| | ||| Sbjct 1137298 CTTTGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTTTGACCTTCTCTAA 1137239 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGC-A 125589 |||||| || | |||| || || | ||| ||||||||| | | || ||||| Sbjct 1137238 CGAGTTGATCAGTAGAGATGAAGGTATGCACACCGACTTTGCCTGTTTGTTG-TTCGCTC 1137180 Query 125590 ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATG 125649 ||| || | || || ||||| ||| ||| || || | ||||| | Sbjct 1137179 ACT---TGAACAACAAG-CCATCTCCAGAGAT-----TGTCGAGAAGATCATTACCGAGG 1137129 Query 125650 CCGTGAGGATAGA-ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATG 125708 | || || || | ||| | | | ||| || | || ||| | || | || ||| Sbjct 1137128 CTGTCTCCATCGAGTCTAGA-TACTTCATCGATGCCTTGCCAGTCTCCTTGTTGGGTATG 1137070 Query 125709 AACTGCAAGCTAATGTGCGAGTACATAGAGTT-TGTGGCAGATCGTCTACTGTACGAGTT 125767 ||||| ||| | ||| | | ||| | ||||| ||| ||||| | |||| | | || Sbjct 1137069 AACTGTAAGTTGATGGTCCAATACGTCGAGTTCTGT-GCAGACAGATTACT-TGC---TT 1137015 Query 125768 GATTGG----CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT 125823 |||| | ||||||||||||| || || || || ||||||||| | ||| | Sbjct 1137014 CTTTGGGTAACAAGAAGATTTACAACGTTAACAACCCATTCGATTTCATGGAAAACATTT 1136955 Query 125824 CACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGG 125881 | | | |||||||||||||| |||||||||| ||| ||| ||| ||| ||| || Sbjct 1136954 CCTTGGCTGGTAAGACCAACTTCTTCGAGAAGAGAGTCTCCGATTACCAAAAGGCT--GG 1136897 Query 125882 TGTC 125885 |||| Sbjct 1136896 TGTC 1136893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059098104360