Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1 212 8e-50 seq8 183 4e-41 >seq1 Length=2934271 Score = 212 bits (234), Expect = 8e-50 Identities = 757/1171 (65%), Gaps = 18/1171 (2%) Strand=Plus/Minus Query 62724 CATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATT 62781 ||||| |||||| || || || |||| ||| |||| |||||||||||| || | Sbjct 86108 CATCTTCTACAAAGGCAGGT--AAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTC 86051 Query 62782 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 62841 || || | ||||| | |||||| || | ||| | ||||||| | || || || Sbjct 86050 AGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTT 85991 Query 62842 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 62901 | ||| || |||| |||||||| ||||| || || | |||||||||||||| || || Sbjct 85990 CTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTC 85931 Query 62902 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT-TGTATC 62960 | | |||| || | ||| | | ||| | | ||||| | || || | || | Sbjct 85930 AGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTGAC---AGTTTGTCTACC 85874 Query 62961 TCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 | |||| | |||||| ||||| |||||| || || |||| | | | Sbjct 85873 ACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGC 85814 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 | || ||| ||||| ||| | | ||| | ||| ||| || | | |||| || Sbjct 85813 TAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTG 85754 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 ||| || | ||| || ||||| | |||| || | |||||||| |||| ||| || || Sbjct 85753 CATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTT 85694 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || ||||||| | | || | ||| | | || || | |||||| || || | ||| Sbjct 85693 ACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTA 85634 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 | ||| | | || || | ||||| || || || || | ||| | ||| ||||| || Sbjct 85633 CAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTT 85574 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | ||||| | ||||||||||||||| ||||| ||||| || || || | || || Sbjct 85573 GAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGA 85514 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 ||| |||| | ||| || || | ||| || || || || | || || || || Sbjct 85513 ACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAA 85454 Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438 || || ||| || || ||||| || || || ||| ||| ||| ||||| || || Sbjct 85453 GGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAG 85394 Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 ||||| ||||||||| | | ||| || || || || || || |||||||| || Sbjct 85393 GAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATG 85334 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATT 63557 || || | || ||| | | || || ||||| || | || || | || Sbjct 85333 GGTGAAATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACC 85274 Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617 | || | || | ||||| | ||| || || || |||||||| | | || || Sbjct 85273 G-TGGACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTCGGCAACTTTACCGT 85215 Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 63675 || ||||||| || ||| | |||| || || |||||||| ||||| || ||||| Sbjct 85214 CGATCCTCAACAAATAAGATCTCTCCATGGTCTTGAAACCAAAGTAGTTATAGTTGAAA- 85156 Query 63676 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 63735 || || || |||| || | ||||| | | ||| || | || | || ||| Sbjct 85155 -TCACGGTCATAAACGATGGCAGAGTTTAACTCATCGGCATGAGCCATGACAATAT-CAT 85098 Query 63736 GGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 63794 | | ||| || | |||||| ||||| ||||| || || |||||||||||| ||| Sbjct 85097 AGGTTTCCTTGGAGACCATAGGAGAATGTAAACCATTCTTTGGGTTGACATAGTTGTATA 85038 Query 63795 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 63854 || | | || ||||| || ||| | |||| ||| || | || || | ||| | Sbjct 85037 AAGAGGCAACGACATCACTGAAACATTTGGTGGTTTGTTTATGCAAGTTAGAGATGGCGA 84978 Query 63855 TTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 |||| ||||||| ||||| || || || || Sbjct 84977 TTCTGGCGGCTAAGATGGCGTAGTCTGGGTG 84947 Score = 158 bits (174), Expect = 2e-33 Identities = 326/482 (68%), Gaps = 5/482 (1%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||||| ||| || |||| || || | | |||||||| || || || | | Sbjct 86997 GTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTCTTCAAA 86938 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGT-TAGTTTGGAATAACTCGGATCTGCTAT 61968 || |||| ||||| || |||||||| || | || ||| | || || || Sbjct 86937 CCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGGGCCT-TGAT 86879 Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028 ||| ||||||| ||||||| |||||| ||| |||| || | ||| |||||||| | || Sbjct 86878 ATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCAAT 86819 Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62088 || |||||||| | | |||||||| || || || | | ||| | || ||||| | Sbjct 86818 GATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGGAT 86759 Query 62089 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62145 ||||| || ||||| ||||| ||| | || || ||||| || || || Sbjct 86758 GTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCGTT 86699 Query 62146 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62205 ||| ||| || ||| |||| | | | || || || | ||| ||||| || Sbjct 86698 CCACAATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAATTCACC 86639 Query 62206 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 62265 | ||| ||||| | || |||||| ||| || ||||| || | | | || || | || Sbjct 86638 GGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAACC 86579 Query 62266 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325 ||| ||||||| ||| || ||||| ||||| || || ||||| ||| ||||| | ||| Sbjct 86578 CAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATACC 86519 Query 62326 GT 62327 || Sbjct 86518 GT 86517 >seq8 Length=648860 Score = 183 bits (202), Expect = 4e-41 Identities = 1044/1635 (64%), Gaps = 83/1635 (5%) Strand=Plus/Plus Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903 |||| ||||||||||| | ||| || || | || || || || || |||||||| || Sbjct 31145 TCCACAGTGAATTGAATAGCAGCCGAAGCTGCTTGAGTCCGAAGGTAATACATTCCTGTC 31204 Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963 || | || ||||||| ||||||||||||||||| | ||||| | | |||||| Sbjct 31205 TTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTGGACAATGTAGGATCT 31264 Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023 |||| ||| || | ||| || ||| ||||| || | || || |||||||| Sbjct 31265 TTCATATAGATGTTGAGAGACTGTGATTGGTCGATAAATGGGGATCTATCAGCAGCCATA 31324 Query 62024 TTTATAATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTT 62081 | || | | |||| || ||||||||||||| |||||||||| ||| |||||||| || Sbjct 31325 TCTACCA-CTACTTTCTGAGGAATTTCCCAAACTGTTTTATAAAGCTC-CTTAATATATT 31382 Query 62082 CTGGAAGGT--TTGTATTC-TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 | |||| || || | || || |||||| | || || || | | || | || Sbjct 31383 CCGGAATCCCGTTCAATCCCTGGATAGATCCATTGTTTGAGATTATGAAACTTTTCACCT 31442 Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198 |||| |||| | | | || || |||| | | || |||||||| || || | Sbjct 31443 CATCTGTCCAGACTCCTAAATCAACCAAGTCTCTCAATAAATAAGGATTAACGACCTGGA 31502 Query 62199 ATTCTCCAGACAATA-CTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 | || || | ||| | | || | || || ||||| ||| ||||| | | ||||| Sbjct 31503 ACTCACCGG-CAAGAGCCCTTCTCGTATAGATATTGGAAGTAAGAGGTTCGAAACACTCA 31561 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 ||| || | || || | ||| || ||| |||||||| || || |||||| ||| Sbjct 31562 CTATAACCGAGGATCTGGGAAGTCGACAGAGTAGGCATAGGCGCGACTAATAAAGAGTTT 31621 Query 62318 CTAAGACCGTATGTTCTGATTTTA-TCTTTTA--GAGGTTCCCAATTCCAAAGATCCGAC 62374 || | || | |||| | | | ||||| | ||||| ||||| |||||||||||| Sbjct 31622 CTTAATCCAAAC-TTCTTAAGTGAGTCTTTAATTGAGGT--CCAATCCCAAAGATCCGAA 31678 Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT--ACTGGCGTACGATCCTACAT 62432 || | ||| || | || || || | | || ||| ||| Sbjct 31679 GGAGTAGTGTCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCGGG--GAACCTTCAT 31736 Query 62433 ATGTATCGTATGGTCC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCG 62488 | | ||| || || || |||||| | | || | | | || | || | ||| Sbjct 31737 AAGAATCATAAGGACCGAATTCCTTGGCCAACTCGAT-AGAAGTTTCCACGGCCGCA--- 31792 Query 62489 TAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTG--CGCTTCCAGGCTATCAAAT 62545 | ||| || |||||||| || | |||| | | |||| | |||| || | ||| Sbjct 31793 TGATATATAGTTTCGAAAATTTGGATATTCAATTTCTTGGCCTCTTC--GGAAGTGAAA- 31849 Query 62546 GGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 62604 | || | || | || || | ||| || | |||||||| || | | | || || | Sbjct 31850 -GCTATTCGGAGCATCATGAATGTGTCAGCGAGACCTTGAACTCCTAAAGCTATTGGACG 31908 Query 62605 ATGTCTCTTATTAGAGATTTCAGCT---TCTGGAATAGGATAATAATTAATATCTATAAT 62661 |||| | || || | | |||| |||| ||||||||||| | ||||||| | Sbjct 31909 ATGTTTGAGGTTGGAATTCTTAGCTGTTTCTG---TAGGATAATAAGTTCTATCTATGAC 31965 Query 62662 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG 62721 ||||| | ||| | ||||| |||| ||| | || ||| |||||| || | Sbjct 31966 CTTATTCAAATTACGAGTAATTATTTTGCACACCGAATGCAATTTTTCAAAATCGAAAC- 32024 Query 62722 CCCATCTAT-TACA-AACATGTTC--AATGCA---------ACAGATGCCAGATTACAAA 62768 || | || | || || |||| || ||| ||||| |||| |||||| | Sbjct 32025 CCAAAGAATCTCCAGAAGATGTCACAAAGGCAGGCAACAGAACAGAAGCCAAATTACATA 32084 Query 62769 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62828 |||| ||| || |||| | ||||| | |||||| || | ||| | | || | Sbjct 32085 CGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACATAAATTGGAAGATTTAA 32144 Query 62829 TGGTTCCTAAATTTTGTTGATTACTCTTTTTG-TTACACGCATCCTTATAAAGAATGAAT 62887 | || || ||||| | ||| || | ||| | |||||| ||| || || || || ||| Sbjct 32145 TAGTCCCCAAATTCTTTTGGTT-CGATTTCAGATTACACAGATCTTTGTAGAGCATAAAT 32203 Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 62947 |||||||| || || ||||| | ||||| || || ||| | |||| | ||| Sbjct 32204 GGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCACAATTTCTGAGCTCTGATT 32263 Query 62948 ATAGA-TTTG-TATCTC----TTTTC---TCTTTCGTATAGTGTATACAATCGTTCGAAC 62998 || |||| | || | ||||| | ||||||| || | ||| || Sbjct 32264 TGAGTCTTTGCTTTCCCCAGGTTTTCATATTTTTCGTAAAGAGC---------TTCAAAT 32314 Query 62999 TCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCT 63058 || ||| || | || | || ||| ||||| ||| | | | |||| | Sbjct 32315 TCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAGAAGAGACTCCACATT 32374 Query 63059 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA-AAGAGCTATAAATAGATC 63117 ||||| | |||||| ||||||||| | |||||| | ||| || || || | ||| Sbjct 32375 TGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAACAGAGGGAACAA-ATC 32433 Query 63118 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG-ATCG--AGGAACGCCATAAT 63174 || | |||| |||||| || || || |||||| | ||| | ||| | | ||| Sbjct 32434 CCTAGCTCTAATTTCCTCTTTCCC---ATGATTTTTACGGATCCCAATGAAATCAAAAAT 32490 Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234 |||| |||||| |||||||| || | ||| ||| | ||||| | || || ||||| || Sbjct 32491 ATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTATTACCTCCTTG 32550 Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294 ||||| ||||| || | || || | ||||||||||| || ||||| ||||| || || Sbjct 32551 ATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATCCCATTAGAGGT 32610 Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63354 ||||| || || ||||| | || ||| | | | ||||| ||| | || || Sbjct 32611 CCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGAATATGCATTCCAAT 32670 Query 63355 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 63414 || ||||| |||||||||| | ||||| || | ||||||| | || ||||| || Sbjct 32671 ACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAAATCCCCTCGAT 32730 Query 63415 ACTATCATCCATCAT 63429 ||||||| |||| Sbjct 32731 GGAATCATCCTTCAT 32745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631912875600