Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 8e-50
seq8 183 4e-41
>seq1
Length=2934271
Score = 212 bits (234), Expect = 8e-50
Identities = 757/1171 (65%), Gaps = 18/1171 (2%)
Strand=Plus/Minus
Query 62724 CATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATT 62781
||||| |||||| || || || |||| ||| |||| |||||||||||| || |
Sbjct 86108 CATCTTCTACAAAGGCAGGT--AAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTC 86051
Query 62782 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 62841
|| || | ||||| | |||||| || | ||| | ||||||| | || || ||
Sbjct 86050 AGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTT 85991
Query 62842 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 62901
| ||| || |||| |||||||| ||||| || || | |||||||||||||| || ||
Sbjct 85990 CTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTC 85931
Query 62902 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATT-TGTATC 62960
| | |||| || | ||| | | ||| | | ||||| | || || | || |
Sbjct 85930 AGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTGAC---AGTTTGTCTACC 85874
Query 62961 TCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018
| |||| | |||||| ||||| |||||| || || |||| | | |
Sbjct 85873 ACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGC 85814
Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078
| || ||| ||||| ||| | | ||| | ||| ||| || | | |||| ||
Sbjct 85813 TAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTG 85754
Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138
||| || | ||| || ||||| | |||| || | |||||||| |||| ||| || ||
Sbjct 85753 CATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTT 85694
Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198
|| ||||||| | | || | ||| | | || || | |||||| || || | |||
Sbjct 85693 ACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTA 85634
Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258
| ||| | | || || | ||||| || || || || | ||| | ||| ||||| ||
Sbjct 85633 CAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTCGACGTAACGAGCAGTGTTGTT 85574
Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318
| ||||| | ||||||||||||||| ||||| ||||| || || || | || ||
Sbjct 85573 GAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGA 85514
Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378
||| |||| | ||| || || | ||| || || || || | || || || ||
Sbjct 85513 ACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAA 85454
Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438
|| || ||| || || ||||| || || || ||| ||| ||| ||||| || ||
Sbjct 85453 GGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAG 85394
Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498
||||| ||||||||| | | ||| || || || || || || |||||||| ||
Sbjct 85393 GAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATG 85334
Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATT 63557
|| || | || ||| | | || || ||||| || | || || | ||
Sbjct 85333 GGTGAAATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACC 85274
Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617
| || | || | ||||| | ||| || || || |||||||| | | || ||
Sbjct 85273 G-TGGACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTCGGCAACTTTACCGT 85215
Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 63675
|| ||||||| || ||| | |||| || || |||||||| ||||| || |||||
Sbjct 85214 CGATCCTCAACAAATAAGATCTCTCCATGGTCTTGAAACCAAAGTAGTTATAGTTGAAA- 85156
Query 63676 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCAT 63735
|| || || |||| || | ||||| | | ||| || | || | || |||
Sbjct 85155 -TCACGGTCATAAACGATGGCAGAGTTTAACTCATCGGCATGAGCCATGACAATAT-CAT 85098
Query 63736 GGTAATACTT-GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATA 63794
| | ||| || | |||||| ||||| ||||| || || |||||||||||| |||
Sbjct 85097 AGGTTTCCTTGGAGACCATAGGAGAATGTAAACCATTCTTTGGGTTGACATAGTTGTATA 85038
Query 63795 AATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTA 63854
|| | | || ||||| || ||| | |||| ||| || | || || | ||| |
Sbjct 85037 AAGAGGCAACGACATCACTGAAACATTTGGTGGTTTGTTTATGCAAGTTAGAGATGGCGA 84978
Query 63855 TTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
|||| ||||||| ||||| || || || ||
Sbjct 84977 TTCTGGCGGCTAAGATGGCGTAGTCTGGGTG 84947
Score = 158 bits (174), Expect = 2e-33
Identities = 326/482 (68%), Gaps = 5/482 (1%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||||||||||| ||| || |||| || || | | |||||||| || || || | |
Sbjct 86997 GTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTCTTCAAA 86938
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGT-TAGTTTGGAATAACTCGGATCTGCTAT 61968
|| |||| ||||| || |||||||| || | || ||| | || || ||
Sbjct 86937 CCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGGGCCT-TGAT 86879
Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028
||| ||||||| ||||||| |||||| ||| |||| || | ||| |||||||| | ||
Sbjct 86878 ATGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCAAT 86819
Query 62029 AATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62088
|| |||||||| | | |||||||| || || || | | ||| | || ||||| |
Sbjct 86818 GATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGGAT 86759
Query 62089 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62145
||||| || ||||| ||||| ||| | || || ||||| || || ||
Sbjct 86758 GTTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCGTT 86699
Query 62146 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62205
||| ||| || ||| |||| | | | || || || | ||| ||||| ||
Sbjct 86698 CCACAATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAATTCACC 86639
Query 62206 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 62265
| ||| ||||| | || |||||| ||| || ||||| || | | | || || | ||
Sbjct 86638 GGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAACC 86579
Query 62266 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 62325
||| ||||||| ||| || ||||| ||||| || || ||||| ||| ||||| | |||
Sbjct 86578 CAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATACC 86519
Query 62326 GT 62327
||
Sbjct 86518 GT 86517
>seq8
Length=648860
Score = 183 bits (202), Expect = 4e-41
Identities = 1044/1635 (64%), Gaps = 83/1635 (5%)
Strand=Plus/Plus
Query 61844 TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTT 61903
|||| ||||||||||| | ||| || || | || || || || || |||||||| ||
Sbjct 31145 TCCACAGTGAATTGAATAGCAGCCGAAGCTGCTTGAGTCCGAAGGTAATACATTCCTGTC 31204
Query 61904 TTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCT 61963
|| | || ||||||| ||||||||||||||||| | ||||| | | ||||||
Sbjct 31205 TTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTGGACAATGTAGGATCT 31264
Query 61964 GCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 62023
|||| ||| || | ||| || ||| ||||| || | || || ||||||||
Sbjct 31265 TTCATATAGATGTTGAGAGACTGTGATTGGTCGATAAATGGGGATCTATCAGCAGCCATA 31324
Query 62024 TTTATAATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAA-CTCGCTTAATATCTT 62081
| || | | |||| || ||||||||||||| |||||||||| ||| |||||||| ||
Sbjct 31325 TCTACCA-CTACTTTCTGAGGAATTTCCCAAACTGTTTTATAAAGCTC-CTTAATATATT 31382
Query 62082 CTGGAAGGT--TTGTATTC-TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138
| |||| || || | || || |||||| | || || || | | || | ||
Sbjct 31383 CCGGAATCCCGTTCAATCCCTGGATAGATCCATTGTTTGAGATTATGAAACTTTTCACCT 31442
Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198
|||| |||| | | | || || |||| | | || |||||||| || || |
Sbjct 31443 CATCTGTCCAGACTCCTAAATCAACCAAGTCTCTCAATAAATAAGGATTAACGACCTGGA 31502
Query 62199 ATTCTCCAGACAATA-CTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257
| || || | ||| | | || | || || ||||| ||| ||||| | | |||||
Sbjct 31503 ACTCACCGG-CAAGAGCCCTTCTCGTATAGATATTGGAAGTAAGAGGTTCGAAACACTCA 31561
Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317
||| || | || || | ||| || ||| |||||||| || || |||||| |||
Sbjct 31562 CTATAACCGAGGATCTGGGAAGTCGACAGAGTAGGCATAGGCGCGACTAATAAAGAGTTT 31621
Query 62318 CTAAGACCGTATGTTCTGATTTTA-TCTTTTA--GAGGTTCCCAATTCCAAAGATCCGAC 62374
|| | || | |||| | | | ||||| | ||||| ||||| ||||||||||||
Sbjct 31622 CTTAATCCAAAC-TTCTTAAGTGAGTCTTTAATTGAGGT--CCAATCCCAAAGATCCGAA 31678
Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT--ACTGGCGTACGATCCTACAT 62432
|| | ||| || | || || || | | || ||| |||
Sbjct 31679 GGAGTAGTGTCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCGGG--GAACCTTCAT 31736
Query 62433 ATGTATCGTATGGTCC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCG 62488
| | ||| || || || |||||| | | || | | | || | || | |||
Sbjct 31737 AAGAATCATAAGGACCGAATTCCTTGGCCAACTCGAT-AGAAGTTTCCACGGCCGCA--- 31792
Query 62489 TAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTG--CGCTTCCAGGCTATCAAAT 62545
| ||| || |||||||| || | |||| | | |||| | |||| || | |||
Sbjct 31793 TGATATATAGTTTCGAAAATTTGGATATTCAATTTCTTGGCCTCTTC--GGAAGTGAAA- 31849
Query 62546 GGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 62604
| || | || | || || | ||| || | |||||||| || | | | || || |
Sbjct 31850 -GCTATTCGGAGCATCATGAATGTGTCAGCGAGACCTTGAACTCCTAAAGCTATTGGACG 31908
Query 62605 ATGTCTCTTATTAGAGATTTCAGCT---TCTGGAATAGGATAATAATTAATATCTATAAT 62661
|||| | || || | | |||| |||| ||||||||||| | ||||||| |
Sbjct 31909 ATGTTTGAGGTTGGAATTCTTAGCTGTTTCTG---TAGGATAATAAGTTCTATCTATGAC 31965
Query 62662 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG 62721
||||| | ||| | ||||| |||| ||| | || ||| |||||| || |
Sbjct 31966 CTTATTCAAATTACGAGTAATTATTTTGCACACCGAATGCAATTTTTCAAAATCGAAAC- 32024
Query 62722 CCCATCTAT-TACA-AACATGTTC--AATGCA---------ACAGATGCCAGATTACAAA 62768
|| | || | || || |||| || ||| ||||| |||| |||||| |
Sbjct 32025 CCAAAGAATCTCCAGAAGATGTCACAAAGGCAGGCAACAGAACAGAAGCCAAATTACATA 32084
Query 62769 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62828
|||| ||| || |||| | ||||| | |||||| || | ||| | | || |
Sbjct 32085 CGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACATAAATTGGAAGATTTAA 32144
Query 62829 TGGTTCCTAAATTTTGTTGATTACTCTTTTTG-TTACACGCATCCTTATAAAGAATGAAT 62887
| || || ||||| | ||| || | ||| | |||||| ||| || || || || |||
Sbjct 32145 TAGTCCCCAAATTCTTTTGGTT-CGATTTCAGATTACACAGATCTTTGTAGAGCATAAAT 32203
Query 62888 GGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATT 62947
|||||||| || || ||||| | ||||| || || ||| | |||| | |||
Sbjct 32204 GGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCACAATTTCTGAGCTCTGATT 32263
Query 62948 ATAGA-TTTG-TATCTC----TTTTC---TCTTTCGTATAGTGTATACAATCGTTCGAAC 62998
|| |||| | || | ||||| | ||||||| || | ||| ||
Sbjct 32264 TGAGTCTTTGCTTTCCCCAGGTTTTCATATTTTTCGTAAAGAGC---------TTCAAAT 32314
Query 62999 TCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCT 63058
|| ||| || | || | || ||| ||||| ||| | | | |||| |
Sbjct 32315 TCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAGAAGAGACTCCACATT 32374
Query 63059 CCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA-AAGAGCTATAAATAGATC 63117
||||| | |||||| ||||||||| | |||||| | ||| || || || | |||
Sbjct 32375 TGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAACAGAGGGAACAA-ATC 32433
Query 63118 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG-ATCG--AGGAACGCCATAAT 63174
|| | |||| |||||| || || || |||||| | ||| | ||| | | |||
Sbjct 32434 CCTAGCTCTAATTTCCTCTTTCCC---ATGATTTTTACGGATCCCAATGAAATCAAAAAT 32490
Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234
|||| |||||| |||||||| || | ||| ||| | ||||| | || || ||||| ||
Sbjct 32491 ATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTATTACCTCCTTG 32550
Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294
||||| ||||| || | || || | ||||||||||| || ||||| ||||| || ||
Sbjct 32551 ATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATCCCATTAGAGGT 32610
Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63354
||||| || || ||||| | || ||| | | | ||||| ||| | || ||
Sbjct 32611 CCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGAATATGCATTCCAAT 32670
Query 63355 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 63414
|| ||||| |||||||||| | ||||| || | ||||||| | || ||||| ||
Sbjct 32671 ACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAAATCCCCTCGAT 32730
Query 63415 ACTATCATCCATCAT 63429
||||||| ||||
Sbjct 32731 GGAATCATCCTTCAT 32745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631912875600
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