Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 1e-33
>seq4
Length=1221263
Score = 158 bits (174), Expect = 1e-33
Identities = 410/622 (66%), Gaps = 5/622 (1%)
Strand=Plus/Plus
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
|| || ||||||||||| || | |||||| |||| |||||||| || ||| ||
Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
|||||||| | | |||| ||||| | ||| || || |||||||| |||| ||
Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268
|| |||||||| ||||| ||||| || || | | || | || ||| ||
Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370
Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328
|||||||| | |||||||| ||||| || | ||| ||||| || | || ||||| ||
Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430
Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388
|| || | | | || || | | ||| ||||| || || || |||| ||| ||
Sbjct 1137431 TTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAAGAGTAA 1137490
Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448
| ||||| |||| |||||||| ||||||||| ||||||||||| | ||| |
Sbjct 1137491 GTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTCAGGA 1137550
Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508
| || || || ||| || |||| || | || || ||||| ||||| || || ||
Sbjct 1137551 AGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGAGGCG 1137610
Query 93509 GCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT---TATC 93564
|| || || ||||| | | || || |||| | |||| | || || | || | |
Sbjct 1137611 GCGAAGAAGGCCAAAACTCTG-GAGATGAAATATCTCTCGTTGTCGTTCAACTTGGTCTT 1137669
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| || | ||| || | || | || ||| | ||||| || || || || ||
Sbjct 1137670 CCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGC 1137729
Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGG 93684
|| |||||||| | ||| || || || || | ||||| || | ||| || | ||
Sbjct 1137730 CTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCTCTTCTT 1137789
Query 93685 GTTATCTTTTAGTAACGGCTCT 93706
||| || | | ||| ||||||
Sbjct 1137790 GTTCTCGATCAATAAAGGCTCT 1137811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860723431640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |