Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 >seq4 Length=1221263 Score = 158 bits (174), Expect = 1e-33 Identities = 410/622 (66%), Gaps = 5/622 (1%) Strand=Plus/Plus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 || || ||||||||||| || | |||||| |||| |||||||| || ||| || Sbjct 1137191 AAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAGAAGGTC 1137250 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 |||||||| | | |||| ||||| | ||| || || |||||||| |||| || Sbjct 1137251 AAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCACTGAAG 1137310 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || |||||||| ||||| ||||| || || | | || | || ||| || Sbjct 1137311 AAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCCTTGTCA 1137370 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||||| | |||||||| ||||| || | ||| ||||| || | || ||||| || Sbjct 1137371 TTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCGATGGCA 1137430 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || | | | || || | | ||| ||||| || || || |||| ||| || Sbjct 1137431 TTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAAGAGTAA 1137490 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | ||||| |||| |||||||| ||||||||| ||||||||||| | ||| | Sbjct 1137491 GTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGTTCAGGA 1137550 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | || || || ||| || |||| || | || || ||||| ||||| || || || Sbjct 1137551 AGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCAGAGGCG 1137610 Query 93509 GCaaaaaaaGCCAATA-TATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT---TATC 93564 || || || ||||| | | || || |||| | |||| | || || | || | | Sbjct 1137611 GCGAAGAAGGCCAAAACTCTG-GAGATGAAATATCTCTCGTTGTCGTTCAACTTGGTCTT 1137669 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| || | ||| || | || | || ||| | ||||| || || || || || Sbjct 1137670 CCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGC 1137729 Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGG 93684 || |||||||| | ||| || || || || | ||||| || | ||| || | || Sbjct 1137730 CTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCTCTTCTT 1137789 Query 93685 GTTATCTTTTAGTAACGGCTCT 93706 ||| || | | ||| |||||| Sbjct 1137790 GTTCTCGATCAATAAAGGCTCT 1137811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860723431640