Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq5 100 2e-16 >seq5 Length=1057341 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || |||||||| | || || || || || || ||||| ||| || | Sbjct 899029 ATGCAAATCTTCGTCAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 898970 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | | || || |||||| |||||||| || |||| || ||| Sbjct 898969 GACACCATTGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 898910 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | |||| || || || |||||||||||| || |||| || | ||||| || Sbjct 898909 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 898850 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 || ||||| |||||||| || || ||||| ||| Sbjct 898849 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 898817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| ||||| || || |||| || || || || || ||||| ||| | Sbjct 899257 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 899198 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | | || || |||||| |||||||| || |||| || ||| Sbjct 899197 GACACTATTGACAATGTTAAGTCCAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 899138 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||||| | || | ||| || || |||||||||||| || |||| | | || || || Sbjct 899137 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCTGACTACAAC 899078 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || |||| ||||| ||| | || | ||||| Sbjct 899077 ATCCAAAAGGAATCCACTTTACACTTAGTTTTGAGATTGAGAGGTGG 899031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039943286200