Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq5 123 2e-23 >seq5 Length=1057341 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| || | || |||||| ||||| || | |||||||| ||||||||||||||||| Sbjct 898802 ACCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCAGA 898861 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| | | |||||| | ||| ||||||||| | || | | |||||||| || || Sbjct 898862 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 898921 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || |||||||| ||| || || | | |||| |||||||| |||||| || Sbjct 898922 AATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCAAC 898981 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || || || || | ||||| || || || ||||| Sbjct 898982 TTCCAAAGTGATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCAT 899029 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||||||||| |||| || ||||| ||||| |||||||| || Sbjct 899028 ATACCACCTCTCAATCTCAAAACTAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 899087 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | | |||||| | ||| |||||||| |||| | | |||||||| || Sbjct 899088 GATAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGT 899147 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| || |||||||| ||| ||| | ||| | | |||| ||||| | ||||| Sbjct 899148 GGAATACCCTCTTTGTCTTGAAT-TTTGGACTTAACATTGTCAATAGTGTCAGAAGATTC 899206 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| ||| || ||||| || ||||| Sbjct 899207 AACTTCCAAAGTGATAGTCTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 899257 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||| || || || || | |||||||| |||||||||||||| || Sbjct 899256 ATACCACCTCTCAATCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCA 899315 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | || || | ||| |||||||| | || | | ||||| || ||| Sbjct 899316 GACAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGA 899375 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | |||| |||||||| || || Sbjct 899376 GGAATACCTTCCTTGTCTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCA 899435 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||||| ||| || || ||||| ||||| Sbjct 899436 ACCTCAAGGGTAATGGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134343675732