Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 2e-23
>seq5
Length=1057341
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| || | || |||||| ||||| || | |||||||| |||||||||||||||||
Sbjct 898802 ACCTCCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCAGA 898861
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||| | | |||||| | ||| ||||||||| | || | | |||||||| || ||
Sbjct 898862 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGG 898921
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || |||||||| ||| || || | | |||| |||||||| |||||| ||
Sbjct 898922 AATACCCTCTTTGTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCAAC 898981
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || || || || | ||||| || || || |||||
Sbjct 898982 TTCCAAAGTGATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCAT 899029
Score = 113 bits (124), Expect = 4e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | |||||||||||| |||| || ||||| ||||| |||||||| ||
Sbjct 899028 ATACCACCTCTCAATCTCAAAACTAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 899087
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | | |||||| | ||| |||||||| |||| | | |||||||| ||
Sbjct 899088 GATAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGT 899147
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331
||||| || |||||||| ||| ||| | ||| | | |||| ||||| | |||||
Sbjct 899148 GGAATACCCTCTTTGTCTTGAAT-TTTGGACTTAACATTGTCAATAGTGTCAGAAGATTC 899206
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || |||| ||| || ||||| || |||||
Sbjct 899207 AACTTCCAAAGTGATAGTCTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 899257
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || | | ||| || || || || | |||||||| |||||||||||||| ||
Sbjct 899256 ATACCACCTCTCAATCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCA 899315
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | || || | ||| |||||||| | || | | ||||| || |||
Sbjct 899316 GACAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGA 899375
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| |||||| || | | |||| |||||||| || ||
Sbjct 899376 GGAATACCTTCCTTGTCTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCA 899435
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| ||| || || ||||| |||||
Sbjct 899436 ACCTCAAGGGTAATGGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134343675732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |