Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 206 5e-48 >seq4 Length=1221263 Score = 206 bits (228), Expect = 5e-48 Identities = 394/575 (69%), Gaps = 9/575 (2%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| || |||||| |||||||||||||| || || |||||||||| Sbjct 1137765 ATCAAGTACCACGAAATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCC 1137706 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCT---GAGAACGAA 42401 |||||||||||| | ||||| | | |||| || | || || ||||| Sbjct 1137705 GAGGAGATTGACTTAAGTAAGGATATCATTGACTGGAAGACCAAGTTGAACGACAACGAG 1137646 Query 42402 AAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 | | |||| || | | ||||||||||||||||||||||||| || ||||| ||| Sbjct 1137645 AGATATTTCATCTCCAGAGTTTTGGCCTTCTTCGCCGCCTCTGACGGTATTGTCAACGAG 1137586 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTT--TGAGGCGCGCTGCTTCTACG 42519 ||| ||| | ||| ||||| || |||| ||| | || ||||||| Sbjct 1137585 AACTTGGTTGAGAACTTCTCTGCCGAGGTTCA--ACTTCCTGAACTGAAGTGTTTCTACG 1137528 Query 42520 GCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGT 42579 | ||||| || || |||||| | ||||||||| ||| | || | |||| | Sbjct 1137527 GTTTCCAAATTATGATGGAGAACATCCACTCTGAGACTTACTCTTTGTTGATTGACACCT 1137468 Query 42580 ACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 ||||| |||||| || | || ||||||| ||||| ||||| || || || | Sbjct 1137467 ACATCAAGGATCCAAAGGAAGCTGACTTCTTGTTCAATGCCATCGAGACTATTCCATGTA 1137408 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 ||||| ||||||| |||||||| | | |||||| | ||||| |||||| | Sbjct 1137407 TCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAATGACAAGGACGCTTTGTTCGGTG 1137348 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 |||| |||| |||||| | ||||| || || ||||||||| || |||| || || | Sbjct 1137347 AGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCCTTTGCTTCTA 1137288 Query 42760 TCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||| | ||| ||| |||| | ||||| || | |||||||| ||||| | ||| Sbjct 1137287 TCTTCTGGTTGAAGAAGAGAGGTTTA-ATGCCAGGTTTGACCTTCTCTAACGAGTTGATC 1137229 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTG 42853 || || || || || |||| | ||||||||||| Sbjct 1137228 AGTAGAGATGAAGGTATGCACACCGACTTTGCCTG 1137194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339070153360