Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=2934271 Score = 96.9 bits (106), Expect = 3e-15 Identities = 271/413 (66%), Gaps = 21/413 (5%) Strand=Plus/Plus Query 20198 TGGGCATCTCCCAACGTGTGAATAAA--CTCCCCGGGTCTAAGACCAGTAACAT-GAGCA 20254 || |||||||||| || ||||| || |||| | | || | | || ||||| |||| Sbjct 112790 TGAGCATCTCCCATGGTATGAATGAAATCTCCACAGTTC--ATATCAC-AACATTGAGCG 112846 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| | || || | | ||||| |||||||| |||||||| ||||| ||||| || Sbjct 112847 ATCATCTTGGTCAATAAAGCGTAGCTAGCAATGTTGAAAGGAACACCCAATCCCATATCA 112906 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCA---------CCGTCAGCTA------CA 20359 | || || ||||| | ||| || | || || || | | || Sbjct 112907 CATGATCTTTGATATAATAAACATGACAATTCCGGTTTCTTTCCCTCTGGGAAATTCACA 112966 Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTC 20419 || |||||||| || | ||||| || || | |||||| | || || | || ||| Sbjct 112967 TAGAATTGACAGAATACATGACATGGTGGTAAAGCCATCTGGGCGAAATCTGGTGGATTC 113026 Query 20420 CACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTAC 20479 || |||| |||||||||||| | || | |||||| | |||| | | || | Sbjct 113027 CAAGCACTCATAATGATTCTACGGTCATAAGGATTAGTCTTTAACTTGTGAATGATCTCT 113086 Query 20480 GACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCA 20539 | | ||||||| | || || |||| ||| || ||| || ||| | || || Sbjct 113087 GCAAGTTGGTCATATCCTTGACCTGAATAATCCAGATCACAATCTTTGTATTCGGCACCG 113146 Query 20540 AAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTG 20592 || || ||||| ||||| || ||||| ||||||||||| ||||| ||||| || Sbjct 113147 AAATGTCTCCATTGGAACCCATAAACCGGTCCCAAATCACCCTCTCTTCTATG 113199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372739311240