Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=2934271
Score = 96.9 bits (106), Expect = 3e-15
Identities = 271/413 (66%), Gaps = 21/413 (5%)
Strand=Plus/Plus
Query 20198 TGGGCATCTCCCAACGTGTGAATAAA--CTCCCCGGGTCTAAGACCAGTAACAT-GAGCA 20254
|| |||||||||| || ||||| || |||| | | || | | || ||||| ||||
Sbjct 112790 TGAGCATCTCCCATGGTATGAATGAAATCTCCACAGTTC--ATATCAC-AACATTGAGCG 112846
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| | || || | | ||||| |||||||| |||||||| ||||| ||||| ||
Sbjct 112847 ATCATCTTGGTCAATAAAGCGTAGCTAGCAATGTTGAAAGGAACACCCAATCCCATATCA 112906
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCA---------CCGTCAGCTA------CA 20359
| || || ||||| | ||| || | || || || | | ||
Sbjct 112907 CATGATCTTTGATATAATAAACATGACAATTCCGGTTTCTTTCCCTCTGGGAAATTCACA 112966
Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTC 20419
|| |||||||| || | ||||| || || | |||||| | || || | || |||
Sbjct 112967 TAGAATTGACAGAATACATGACATGGTGGTAAAGCCATCTGGGCGAAATCTGGTGGATTC 113026
Query 20420 CACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTAC 20479
|| |||| |||||||||||| | || | |||||| | |||| | | || |
Sbjct 113027 CAAGCACTCATAATGATTCTACGGTCATAAGGATTAGTCTTTAACTTGTGAATGATCTCT 113086
Query 20480 GACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCA 20539
| | ||||||| | || || |||| ||| || ||| || ||| | || ||
Sbjct 113087 GCAAGTTGGTCATATCCTTGACCTGAATAATCCAGATCACAATCTTTGTATTCGGCACCG 113146
Query 20540 AAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTG 20592
|| || ||||| ||||| || ||||| ||||||||||| ||||| ||||| ||
Sbjct 113147 AAATGTCTCCATTGGAACCCATAAACCGGTCCCAAATCACCCTCTCTTCTATG 113199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372739311240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |