Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 215 6e-51 >seq1 Length=2934271 Score = 215 bits (238), Expect = 6e-51 Identities = 923/1447 (64%), Gaps = 25/1447 (2%) Strand=Plus/Minus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| || || || |||| |||||||||||| | || || || || ||||| Sbjct 86607 GTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATT 86548 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTCCTTGAGGGCGTC 114072 || || | | | ||| | | ||| | || ||||| | ||||| | || Sbjct 86547 GGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAAT-CTCTCCTTCAACAGATC 86489 Query 114073 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGA 114132 |||||| | | ||| || | | ||||| ||| || || | | |||||| || Sbjct 86488 CCAGTCCCACAAGTCGGTTGGCTTTCTGTCCCACAAATCGAATTGTAATAAACCTTGAGA 86429 Query 114133 GGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 114192 ||||| |||||||| | | |||||| || |||||| ||||||||| || Sbjct 86428 AGCTGGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTCGATACTTTG 86369 Query 114193 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 114252 ||||| || ||||| || || ||||| || || || |||| | |||||||||| | Sbjct 86368 CTCGACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAAC 86309 Query 114253 GGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 114312 || || || | | || | || || || ||| || | |||||||||||| ||| | Sbjct 86308 AGAGTCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGACACCAAGGGC 86249 Query 114313 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATC 114372 |||||| | | |||| ||||| |||| || || || || || || | || || || Sbjct 86248 AATTGGTCTGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTAGTAGTTTCTGTC 86189 Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432 || | | | || | ||| | || || | ||| | ||||| || | ||| || || Sbjct 86188 AATGATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTTCTC-AAAGT 86130 Query 114433 AAAACTGCGAGT-------CTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGAT 114485 || ||| | || || | ||| | ||| | ||| || || |||| | Sbjct 86129 TGTACCACGATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAGT 86070 Query 114486 TACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAAC 114545 |||| || | || || || |||| || || | ||| || |||||| || ||| Sbjct 86069 TACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAG 86010 Query 114546 TCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCA 114605 ||| || | |||||||||||||| || | ||| ||||||| ||||| ||||| | || Sbjct 86009 ACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACA 85950 Query 114606 TGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-GACATCGGCGGCT 114664 || |||| || || ||||| ||||| | || | ||| | | ||| | || | | || Sbjct 85949 TGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCT 85890 Query 114665 GGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAA 114720 | ||||| ||| || || || || | |||||| || ||| | || || Sbjct 85889 TG-ACAGT----TTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAA 85835 Query 114721 CTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTG 114780 ||| ||||| |||| | | ||||| || | || ||| |||| | | ||| | Sbjct 85834 CTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATC 85775 Query 114781 ACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATC 114840 || || || | | |||||| | ||||||||||| | ||||| ||| | ||| Sbjct 85774 TTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATC 85715 Query 114841 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 114900 | | | |||||| | || ||||| | | || | ||||| | ||| || Sbjct 85714 TCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTC 85655 Query 114901 CGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--ACCAGCCTGGTT 114957 || ||||| || || | ||||| || | | ||| | | |||| | |||| Sbjct 85654 GGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGGTC 85595 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || | || ||| || || || | || ||||||||| ||||| | || || Sbjct 85594 GACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACC 85535 Query 115018 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 || || || ||| ||| | ||||||| | | ||||| |||| ||||||||| Sbjct 85534 GTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACC 85475 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || || ||| || || || ||||| | | | || | || || || ||||| || Sbjct 85474 ACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGA 85415 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 || |||| | || | |||||| || ||||||||||| ||| ||||||||||| Sbjct 85414 ATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTT 85355 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCA 115256 ||| | ||||| | || ||| |||| |||| | |||| | | | || ||||| | Sbjct 85354 GAACAAAGTTGGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATGTTATAAGTCTCGA 85296 Query 115257 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGG 115316 ||| |||| || ||||| | ||| || | ||| | |||| || | ||| | Sbjct 85295 TGACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCAAATGTTGTG 85236 Query 115317 GTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 115376 || |||| | |||| |||| |||| | ||| |||||| |||||||| || Sbjct 85235 GTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGGTCTTGAAAC 85176 Query 115377 CAAAATA 115383 |||| || Sbjct 85175 CAAAGTA 85169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353517863880