Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq5 100 3e-16 seq1 82.4 8e-11 >seq5 Length=1057341 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | |||| || ||||| |||||||||||||| || | Sbjct 899258 ACCACCTCTCAATCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAGTCAGA 899317 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | |||| || | ||||| || ||| |||| | | || || || ||||| Sbjct 899318 CAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGGAGG 899377 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || || | || || Sbjct 899378 AATACCTTCCTTGTCTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTCAAC 899437 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| ||||||||||| || |||||||||||||| Sbjct 899438 CTCAAGGGTAATGGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| |||| || ||||| ||||||||||||||||| | | || | Sbjct 898812 AATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAATCAGACAAAGTTCTA 898871 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | ||||| || || |||| | | || ||||| || ||||| || ||| Sbjct 898872 CCATCTTCCAATTGCTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCCTCT 898931 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||| ||| || | || || || || ||||| | ||| Sbjct 898932 TTGTCTTGAATTTTAGACTTGACATTGTCAATGGTGTCGGAGGATTCAACTTCCAAAGTG 898991 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | ||||| || || || ||||| ||||| |||||||| Sbjct 898992 ATAGTCTTACCAGTTAAGGTTTTGACGAAGATTTGCAT 899029 >seq1 Length=2934271 Score = 82.4 bits (90), Expect = 8e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| |||||||||| ||||||||| || || ||||||| |||| || || ||||| Sbjct 86607 GTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATT 86548 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || |||||||||||||||| || |||||| || || | | | || || || Sbjct 86547 GGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAATCTCTCCTTCAACAGATCC 86488 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACC 154243 || | |||||||| ||| || | || ||||| ||| |||| || | ||| Sbjct 86487 CAGTCCCACAAGTCGGTTGGCTTTCTGTCCCACAAATCGAATTGTAATAAACC 86435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644731298840