Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 203 4e-47 seq8 100 3e-16 >seq1 Length=2934271 Score = 203 bits (224), Expect = 4e-47 Identities = 928/1461 (64%), Gaps = 27/1461 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | ||||| ||||| || || || |||| |||||||||||| | || || Sbjct 86619 TAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAA 86560 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCC-CTAATGCGTTC 116021 || || ||||| || || | | | ||| | | ||| | ||||| | || Sbjct 86559 GCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAAT-CTCTC 86501 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| | |||||||| | | ||| || | ||||||| ||| || || | Sbjct 86500 CTTCAACAGATCCCAGTCCCACAAGTCGGTTGGCTTTCTGTCCCACAAATCGAATTGTAA 86441 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 | |||||| || ||||| |||||||| | | ||||| || |||||| ||||| Sbjct 86440 TAAACCTTGAGAAGCTGGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAA 86381 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 |||| || ||||| || ||||| || || ||||| || || || |||| | | Sbjct 86380 TTCGATACTTTGCTCGACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTC 86321 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||||||||| | || || || | | | | || || || ||| || | |||||| Sbjct 86320 CTTGGCCTCAACAGAGTCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTG 86261 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 |||||| ||| ||||||| | | |||| ||||| |||| || || || || || || Sbjct 86260 GACACCAAGGGCAATTGGTCTGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTA 86201 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 | || || || || | | | || | ||| | || || | ||| | ||||| || | Sbjct 86200 GTAGTTTCTGTCAATGATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAA 86141 Query 116382 CTTTTCGTAATCAAAACTGCGAGT-------CTCTTCATTGACATACTTAGGAAGGGCGA 116434 ||| || || || ||| | || || | ||| | ||| | ||| | Sbjct 86140 CTTCTC-AAAGTTGTACCACGATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAA 86082 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || |||| ||||| || | || || || |||| || || | ||| || || Sbjct 86081 TAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAAC 86022 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 |||| || ||| ||| || | |||||||||||||| || | ||| ||||||| |||| Sbjct 86021 ACAAGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCAT 85962 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA-T 116613 | ||||| | ||| |||| || || ||||| ||||| | || | ||| | | ||| Sbjct 85961 CTTTGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACA 85902 Query 116614 ACATCGGCGGCTGGCACAGTGGCGTTGGCT----CGCCCCTCCTCCTCGTACTTTGTGTA 116669 | || | | || | ||||| ||| || || || || | |||||| || ||| Sbjct 85901 ATTTCTGGGCCTTG-ACAGT----TTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTA 85847 Query 116670 GAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAA 116729 | || ||||| ||||| | |||| | | ||||| || | || |||| |||| Sbjct 85846 CAAAGCAATGAACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAA 85787 Query 116730 GAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 | | ||| | || || || | | |||||| | ||||||||||| | || Sbjct 85786 CAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGC 85727 Query 116790 CGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 116849 | ||| | ||| | | | |||||| | || ||||| | | || | || Sbjct 85726 TGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAA 85667 Query 116850 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGAC---- 116905 ||| | ||| || || ||||| || || | ||||| || | | | ||| | | Sbjct 85666 GTCGAAGATGTCGGCATGCCATGGCTCAATGTACAAGGC-AAAGGCACCTGGTCTCTTGT 85608 Query 116906 GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATAC 116965 |||| | |||| || || | || || ||| || || | || ||||||||| |||| Sbjct 85607 TACCACCTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATAC 85548 Query 116966 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGT 117025 | | || || || || || ||| ||| ||||||| | | |||||| | Sbjct 85547 CGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATAT 85488 Query 117026 GCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGA 117085 ||| ||||||||| || || ||| || || || ||||| | | | || | || | Sbjct 85487 GCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAA 85428 Query 117086 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTG 117145 | || ||||| || || |||| | || | ||||| || ||||||||||| || Sbjct 85427 TACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTG 85368 Query 117146 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTA 117204 | |||||||||||||| | ||||| | || ||| |||| |||| | |||| | | Sbjct 85367 GAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATG 85309 Query 117205 TCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATA 117264 | || ||||| | ||| |||| || ||||| | ||| || | ||| | |||| Sbjct 85308 TTATAAGTCTCGATGACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATA 85249 Query 117265 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 117324 || | ||| ||| |||| | |||| |||| |||| | ||| ||||| Sbjct 85248 TTCAAATGTTGTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCC 85189 Query 117325 AAGGTCTTGAGACCAAAATAG 117345 | |||||||| |||||| ||| Sbjct 85188 ATGGTCTTGAAACCAAAGTAG 85168 >seq8 Length=648860 Score = 100 bits (110), Expect = 3e-16 Identities = 754/1200 (63%), Gaps = 41/1200 (3%) Strand=Plus/Plus Query 116062 TCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATAT 116121 ||||| | |||||| || || | |||| ||| || || || ||| | | ||||| Sbjct 31688 TCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCGGGGAACCTTCATAAGAATCATAA 31747 Query 116122 GGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCA 116181 || || ||| ||||| ||| | || | ||| || ||||| || || || Sbjct 31748 GGACCGAATTCCTTGGCCAACTCGATAGAAGTTTCCACGGCCGCATGATATATAGTTTCG 31807 Query 116182 AAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATA 116241 ||||| | ||||| | ||||||||| |||||| || || | ||| || || Sbjct 31808 AAAATTTGGATATTCAATTTCTTGGCCTCTTCGGAAGTGAAAGCTATTCGGAGCATCATG 31867 Query 116242 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 116301 ||| || ||||||||||| || || | | ||||| |||||| | | || || || Sbjct 31868 AATGTGTCAGCGAGACCTTGAACTCCTAAAGCTATTGGACGATGTTTGAGGTTGGAATTC 31927 Query 116302 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 116361 ||| || || |||||| || | ||||| || ||| |||| | ||| || | Sbjct 31928 TTAGCTGTTTCTGTAGGATAATAAGTTCTATCTATGACCTTATTCAAATTACGAGTAATT 31987 Query 116362 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT-GACAT- 116419 | || | ||| | ||||| |||| |||| || ||| || || | Sbjct 31988 ATTTTGCACACCGAATGCAATTTTTCAAAATCGAAACCCAAAGAATCTCCAGAAGATGTC 32047 Query 116420 ACTTAGGAAGGGCG----ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475 || ||| ||| | || |||| |||||| || | ||||| | || ||| | Sbjct 32048 ACAAAGGCAGGCAACAGAACAGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAA 32107 Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535 || || | ||| || ||| ||||| ||| ||||| || ||||| |||||||| || Sbjct 32108 TATTCAACAATCTCACAACATAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTTC 32167 Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGAC 116595 || || |||||| ||| |||||||||||| |||| || || ||||| | || | Sbjct 32168 GATTTCAGATTACACAGATCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCT 32227 Query 116596 TTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCG--TTGGCTCGCCCCTCCT 116653 | | || || ||| | | ||| | | | | | || ||| |||| | Sbjct 32228 TCTAAGATGGCGGACCACAATTTCTGAGCT--CTGATTTGAGTCTTTGCTTTCCCCAGGT 32285 Query 116654 CCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCA-CCCACAGCCTCT-GAGAGCCCTGG 116711 || || ||| ||| || || ||||| || || ||| | || || | ||||| Sbjct 32286 TTTCATATTTTTCGTAAAGAGCTTCAAATTC--CAGTCCATAAGTACTGGATAAACCTGG 32343 Query 116712 TGCCTTATCTGGACAGAAGAGAGACCA---TTGACCACCCTCCTCAACCCGCTTCATGAA 116768 | | || ||| |||||||| ||| ||| || ||||| || | ||||| || Sbjct 32344 AGTTTCATTAGGAGAGAAGAGACTCCACATTTGGTCA--TTCCTC-ACTCTTTTCATAAA 32400 Query 116769 GAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTG 116828 | || || | ||| | | | ||| | ||||| | | | ||| || | ||| || Sbjct 32401 TAAATCAGGCACCCACAACAGAGGGAACAAATCCCTAGCTCTAATTTCCTCTTTCCCATG 32460 Query 116829 ATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGC 116888 ||| ||| | | | | || || | ||||| ||||| ||||||| ||||| || Sbjct 32461 ATTTTTACGGATCCCAATGAAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGC 32520 Query 116889 GATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAA 116942 ||| | || | ||| | ||| | || | |||||| || || | ||| || Sbjct 32521 GATAGCACCAGGTCTCTT---ATTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAA 32577 Query 116943 TACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT- 117001 || | | ||| || || || |||| ||| ||||| || || | | || ||| Sbjct 32578 CACTCTCAACATCGGGATAATCCCATTAGAGGTCCCATTAGT--ACCAGAGATGAAACTC 32635 Query 117002 -TGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGT 117060 | | ||||| || ||| || ||||| |||||||| ||||| || ||||| Sbjct 32636 CCAGTCGATCTGATATTGTGAATATGCATTCCAATACCTCCTGCATTTTTAGAGATCATC 32695 Query 117061 GCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGG 117120 ||||||||| |||| | | | ||||| ||||| || ||| |||| |||| | ||| Sbjct 32696 GCGCACTCCTTGAGCGTATCAAAAATCCCCTCGATGGAATCATCCTTCATTGCCACAAGG 32755 Query 117121 AAGCAGCTCGACATT---TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 117177 ||||| |||| | || || || | ||||||| ||||| || || || | | Sbjct 32756 AAGCA---TGACAGTAACTGGGGTCTCAGAGTACCAGAATTGAAAAGTGTAGGACTTCCA 32812 Query 117178 TGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGA-CAGAGGGAATGTCTTC 117236 || | ||| | || || ||||||| ||||| || || || | ||| | ||||||||| Sbjct 32813 TGTACGAAGAAACGTTTGGACATCAATTCGTAAGTTTCTAATATCAG-GTCAATGTCTTC 32871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507115642760