Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 3e-20
seq5 114 3e-20
>seq8
Length=648860
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| | || ||||||||||||| ||||||||||| |||||| || ||
Sbjct 616593 TCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 616652
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
||| |||| ||||| || || ||||| | | || ||||| || || || ||
Sbjct 616653 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 616712
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||| ||| ||| || | |||||| | | ||| || ||||| || ||
Sbjct 616713 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCCAAGGTAAT 616772
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || || ||||||||
Sbjct 616773 GGTCTTACCTGTCAAAGTCTTAACGAAAATTTG 616805
>seq5
Length=1057341
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | ||| | ||| || |||||||||| ||||||||||| ||||| || ||
Sbjct 899042 TCTCAAAACTAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 899101
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || ||||| | | || ||||| || ||| || |||
Sbjct 899102 ATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCCTCTTT 899161
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| ||||| || ||| || || | ||||| | | ||| || ||||| |||||
Sbjct 899162 GTCTTGAATTTTGGACTTAACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 899221
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | ||| || ||||| |||||
Sbjct 899222 AGTCTTACCAGTCAAAGTCTTAACAAAGATTTG 899254
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | || ||||| || ||||| ||||||||||| || |||||| | |||||||||
Sbjct 898908 AAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAACA 898849
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
| || || || |||||||||||| | || ||||||
Sbjct 898848 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 898814
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921433845737
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |