Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8 114 3e-20 seq5 114 3e-20 >seq8 Length=648860 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || ||||||||||||| ||||||||||| |||||| || || Sbjct 616593 TCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 616652 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||||| || || ||||| | | || ||||| || || || || Sbjct 616653 ATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCCTCCTT 616712 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| ||| || | |||||| | | ||| || ||||| || || Sbjct 616713 GTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAACTTCCAAGGTAAT 616772 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || || |||||||| Sbjct 616773 GGTCTTACCTGTCAAAGTCTTAACGAAAATTTG 616805 >seq5 Length=1057341 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | ||| || |||||||||| ||||||||||| ||||| || || Sbjct 899042 TCTCAAAACTAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 899101 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| ||||| || || ||||| | | || ||||| || ||| || ||| Sbjct 899102 ATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCCTCTTT 899161 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || ||||| || ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 899162 GTCTTGAATTTTGGACTTAACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 899221 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | ||| || ||||| ||||| Sbjct 899222 AGTCTTACCAGTCAAAGTCTTAACAAAGATTTG 899254 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | || ||||| || ||||| ||||||||||| || |||||| | ||||||||| Sbjct 898908 AAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAACA 898849 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || |||||||||||| | || |||||| Sbjct 898848 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 898814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921433845737