Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4 150 2e-31 >seq4 Length=1221263 Score = 150 bits (166), Expect = 2e-31 Identities = 372/560 (66%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 ||||| ||| || ||||||||| |||| || || || || || | ||||| Sbjct 1137184 GAACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGA 1137243 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| ||||| || ||||| | || | || || | ||| || || | || || || Sbjct 1137244 GAAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACC 1137303 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064 ||||||| || || ||||| || || || |||| | ||| |||||| || || Sbjct 1137304 ACTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTC 1137363 Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTC 133124 ||| |||||| | || ||||| |||||||| || |||| || || || || || Sbjct 1137364 CTTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTC 1137423 Query 133125 GATGGCGTTCAACAAACGG--AGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGG 133182 |||||| || ||||| | || ||| ||| || | | ||||||||| || | Sbjct 1137424 GATGGCATTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG-ATGTAGGTGTCAATCAAC 1137481 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 || || | || ||||| | ||||||||| ||||| || ||||| || ||| | Sbjct 1137482 AAAGAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTC 1137541 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302 || | || || || || ||| ||| |||| || |||||||| || ||| Sbjct 1137542 AGTTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCG 1137601 Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA- 133361 || ||||||||| ||||||| || |||||||| | ||||||||||||||| Sbjct 1137602 TCAGAGGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGTTGTCGTTCAAC 1137661 Query 133362 --GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGAC 133419 | || |||||| | ||||| | ||| | ||||||| ||||||| || || Sbjct 1137662 TTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAA 1137721 Query 133420 GCCTCGGCTTTTTTGTACAT 133439 |||||||| || |||||||| Sbjct 1137722 GCCTCGGCCTTCTTGTACAT 1137741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172731226240