Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4 150 2e-31
>seq4
Length=1221263
Score = 150 bits (166), Expect = 2e-31
Identities = 372/560 (66%), Gaps = 7/560 (1%)
Strand=Plus/Plus
Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944
||||| ||| || ||||||||| |||| || || || || || | |||||
Sbjct 1137184 GAACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGA 1137243
Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004
||| ||||| || ||||| | || | || || | ||| || || | || || ||
Sbjct 1137244 GAAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACC 1137303
Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTC 133064
||||||| || || ||||| || || || |||| | ||| |||||| || ||
Sbjct 1137304 ACTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTC 1137363
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTC 133124
||| |||||| | || ||||| |||||||| || |||| || || || || ||
Sbjct 1137364 CTTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTC 1137423
Query 133125 GATGGCGTTCAACAAACGG--AGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGG 133182
|||||| || ||||| | || ||| ||| || | | ||||||||| || |
Sbjct 1137424 GATGGCATTGAACAAGAAGTCAGCTTC-CTTTGGATCCTTG-ATGTAGGTGTCAATCAAC 1137481
Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242
|| || | || ||||| | ||||||||| ||||| || ||||| || ||| |
Sbjct 1137482 AAAGAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTC 1137541
Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302
|| | || || || || ||| ||| |||| || |||||||| || |||
Sbjct 1137542 AGTTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCG 1137601
Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA- 133361
|| ||||||||| ||||||| || |||||||| | |||||||||||||||
Sbjct 1137602 TCAGAGGCGGCGAAGAAGGCCAAAACTCTGGAGATGAAATATCTCTCGTTGTCGTTCAAC 1137661
Query 133362 --GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGAC 133419
| || |||||| | ||||| | ||| | ||||||| ||||||| || ||
Sbjct 1137662 TTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAA 1137721
Query 133420 GCCTCGGCTTTTTTGTACAT 133439
|||||||| || ||||||||
Sbjct 1137722 GCCTCGGCCTTCTTGTACAT 1137741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172731226240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |