Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 311 1e-79
seq4 100 4e-16
>seq1
Length=2934271
Score = 311 bits (344), Expect = 1e-79
Identities = 1119/1729 (65%), Gaps = 47/1729 (3%)
Strand=Plus/Plus
Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686
||| | ||||| || ||| |||| || || | || || || | ||||| || ||
Sbjct 85250 ATGAGAGTCGCCATTGGTGTCCACGGTGATAACATCGAGAAGGTCATCGAGACTTATAAC 85309
Query 111687 AAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745
| | |||| | |||| |||| ||| || | ||||| | |||||||||||||| ||
Sbjct 85310 ATGTTGTCTTTGAAGTAT-TTCACCCATGCTTCTCCAACTTTGTTCAACGCTGGTACTCC 85368
Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805
| || |||||||| |||||||||| |||| | ||||||||||| ||| | || ||
Sbjct 85369 ACACCCACAAATGTCTTCTTGTTTCCTTGTTGCCATGAAGGAGGATTCTATCGAAGGTAT 85428
Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865
||| | |||| | | || |||||| || || ||| || |||||||| || ||||
Sbjct 85429 TTATGACACTTTGAAAGAGTGTGCCTTGATTTCCAAGACTGCCGGTGGTATTGGTTTGCA 85488
Query 111866 CATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGG 111925
||||| | | ||||||| ||| ||| ||||| || ||| || | ||
Sbjct 85489 TATCCACAACATTAGAGCCACTGGTTCTTACATTGCCGGTACTAACGGTACTTCCAACGG 85548
Query 111926 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCG 111985
||||||||||||| || | || || ||| ||| || || || || |||||| || |
Sbjct 85549 TATTATTCCAATGGTTAGAGTCTTCAACAACACTGCTCGTTACGTCGACCAAGGTG---G 85605
Query 111986 TCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGA 112039
| |||| || | | || | || ||||||||||||| || || ||| | ||
Sbjct 85606 TAACAAGAGACCAGGTGCCTTTGCCTTGTACATTGAGCCATGGCATGCCGACATCTTCGA 85665
Query 112040 GTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTC 112099
||| |||| | | || || ||| | || || | | | ||| | ||| |
Sbjct 85666 CTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATTAGAGCCAGAGATTTGTTCCC 85725
Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159
||| | ||||| |||||| | |||||| | ||||| || ||| ||||| | |
Sbjct 85726 AGCTTTATGGATCCCAGATTTGTTCATGCAAAGAGTCGAAAAGAACCAAGATTGGACCTT 85785
Query 112160 CTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCT 112219
|| | |||| | | || || ||| | |||| | ||||| ||||| || |
Sbjct 85786 GTTCTCTCCAAATGAAGCTCCAGGTTTAGCCGAGGTTTACGGTGATGAGTTCATTGCTTT 85845
Query 112220 CTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG-ATGTGT 112278
||| || |||||| ||||| | || | | || || | || | | | |||
Sbjct 85846 GTACGAGAAATACGAGAAAGAAGGCCGTGGTAGACAAACTGT-CAAGGCCCAGAAATTGT 85904
Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338
|| | | ||| | || ||||||| ||||| ||||| |||| ||| | |||||||| |
Sbjct 85905 GGTACTCCATTTTGGAGGCTCAAACTGAGACCGGTACTCCATTCATGTTGTACAAAGATG 85964
Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398
| |||||| | |||| || |||||||| |||||| | |||||| ||| ||| | |||
Sbjct 85965 CTTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATTATCAAGTCTTCTAACTTGTGTT 86024
Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458
|| || | |||| | | ||| || || || || || |||||| | || || || |
Sbjct 86025 GTGAGATTGTCGAATATTCTGACCCTGAAGAAACAGCCGTTTGTAACTTGGCCTCTATTG 86084
Query 112459 CTCTCCCCAAGTATGTGGATCCAGA----GACAAA--GACATTTGATTATGAAAAACTCC 112512
| | || | ||| || || || ||| | | | | ||| || | |
Sbjct 86085 CCTTACCTGCCTTTGTAGAAGATGATGGTGAAAAATCGTGGTACAACTTTGAGAAGTTGC 86144
Query 112513 ACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 112572
||||| || | || || || | |||| | |||| | ||||| ||||| | ||||
Sbjct 86145 ACGAAATTGCCAAGTTGGTTACTAGAAACTTGAACAAGATCATTGACAGAAACTACTACC 86204
Query 112573 CCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632
| ||||| ||||| | |||||||| |||| || | ||||||| || ||||||||||
Sbjct 86205 CAGTTGAAACTGCCAGAAAATCTAACATGAAGAACAGACCAATTGCCCTTGGTGTCCAAG 86264
Query 112633 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692
|| | || ||| ||||| | | | || || || | || || ||||||
Sbjct 86265 GTTTGGCCGATACTTTCATGAAGTTCAGAGTTGGTTTCGACTCTGTTGAGGCCAAGGAAT 86324
Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGG 112752
| || | || || ||||| || || ||||| ||| | ||| ||| || ||||
Sbjct 86325 TGAACATTCAAATCTTCGAGACCATCTACCACGCTGCTGTCGAGCAAAGTATCGAATTGG 86384
Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC 112812
| |||||| |||||||| || | ||||| ||||||||||| ||||| | | |
Sbjct 86385 CCATGGTTGAAGGTCCATACCCAAGTTACGAGGGATCTCCAGCTTCTCAAGGTTTATTAC 86444
Query 112813 AATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACTACGACTGGGACGCTCTCAAGGAA 112871
|||| ||| ||||||| | || |||| | | | |||||||| | |||||
Sbjct 86445 AATTCGATTTGTGGGACAGAAAG-CCAACCGACTTGTGGGACTGGGATCTGTTGAAGGAG 86503
Query 112872 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931
| | || | ||| | | ||| | | ||| | || ||||||||||| || ||
Sbjct 86504 AGATTAGCTAAGCACGGTATGAGAAACTCTTTGTTGGTTGCTCCAATGCCAACTGCTTCT 86563
Query 112932 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCT 112990
|| | |||||||||||| | || ||||| || || || ||||| | ||||| || |||
Sbjct 86564 ACTTCTCAAATCTTGGGTTACAACGAATGTTTCGAGCCGTACACTTCTAACATTTACTCT 86623
Query 112991 GAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-CTCGTGGA-TGACCTC 113048
|||||| | || || || || ||||||||| ||| || || | || |
Sbjct 86624 -AGAAGAGTGTTGGCCGGTGAATTCCAAATTGTCAAC--CCATACTTGTTAAGAGATTTG 86680
Query 113049 AAAGAGATTGGTCTCTGGTCCAAGGATATGAAG---GATCTCA-TGGTGAAAGCGGGTGG 113104
|| | || | ||| | | |||||| || ||| | || | | ||
Sbjct 86681 GTTGATTTGGGATTGTGGAACGACTCCATGAAGAACCATATCATTTCCGATAAC----GG 86736
Query 113105 TTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTG 113164
|| |||||||| | | || ||||||||| | ||||| | ||| || |||||
Sbjct 86737 ATCTATTCAAAACTTGCCAAACATCCCAGATGAATTGAAGAAAATCTACAAGACCGTTTG 86796
Query 113165 GGAA----ATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTG 113220
|||| |||| ||| ||||||||||||| || || |||||| || |||||
Sbjct 86797 GGAATTGTCTCAA----AAGACCATCATTGACATGGCTGCCGACCGTGGTGCCTACATTG 86852
Query 113221 ATCAAAGTCAAAGTATGAATCTATTCATGGAAAG--TCCAACGATGTCCAAGCTCTCTTC 113278
||||| |||| | |||| ||||||| ||| ||||| ||| ||| | |
Sbjct 86853 ATCAATCTCAATCTTTGAA--TATTCATATCAAGGCCCCAACTATGGGTAAGTTGACCAG 86910
Query 113279 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327
||||||| | ||| |||||||||||||| | || || || ||||| |||
Sbjct 86911 TATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACCGGTATGTACTAC 86959
>seq4
Length=1221263
Score = 100 bits (110), Expect = 4e-16
Identities = 147/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158
|||||| | || |||||||||| | |||| || || |||||| ||| ||| | ||
Sbjct 1137429 GCCATCGAGACTATTCCATGTATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAAT 1137370
Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217
|||| | ||| || || | |||| || | | || ||||| ||||| ||||||||
Sbjct 1137369 GACAAGGACGCTTTG-TTCGGTGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTT 1137311
Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276
|||| ||||||||| ||| |||| | ||| | |||||| ||||| | |||||||||
Sbjct 1137310 CTTCAGTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTT 1137252
Query 102277 TCTGCTTCTCCAACGAGCTTATC 102299
| |||||| |||||| | |||
Sbjct 1137251 TGACCTTCTCTAACGAGTTGATC 1137229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742314647920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |