Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 311 1e-79 seq4 100 4e-16 >seq1 Length=2934271 Score = 311 bits (344), Expect = 1e-79 Identities = 1119/1729 (65%), Gaps = 47/1729 (3%) Strand=Plus/Plus Query 111627 ATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGAC 111686 ||| | ||||| || ||| |||| || || | || || || | ||||| || || Sbjct 85250 ATGAGAGTCGCCATTGGTGTCCACGGTGATAACATCGAGAAGGTCATCGAGACTTATAAC 85309 Query 111687 AAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACC 111745 | | |||| | |||| |||| ||| || | ||||| | |||||||||||||| || Sbjct 85310 ATGTTGTCTTTGAAGTAT-TTCACCCATGCTTCTCCAACTTTGTTCAACGCTGGTACTCC 85368 Query 111746 AAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCAT 111805 | || |||||||| |||||||||| |||| | ||||||||||| ||| | || || Sbjct 85369 ACACCCACAAATGTCTTCTTGTTTCCTTGTTGCCATGAAGGAGGATTCTATCGAAGGTAT 85428 Query 111806 TTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCA 111865 ||| | |||| | | || |||||| || || ||| || |||||||| || |||| Sbjct 85429 TTATGACACTTTGAAAGAGTGTGCCTTGATTTCCAAGACTGCCGGTGGTATTGGTTTGCA 85488 Query 111866 CATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGG 111925 ||||| | | ||||||| ||| ||| ||||| || ||| || | || Sbjct 85489 TATCCACAACATTAGAGCCACTGGTTCTTACATTGCCGGTACTAACGGTACTTCCAACGG 85548 Query 111926 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCG 111985 ||||||||||||| || | || || ||| ||| || || || || |||||| || | Sbjct 85549 TATTATTCCAATGGTTAGAGTCTTCAACAACACTGCTCGTTACGTCGACCAAGGTG---G 85605 Query 111986 TCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGA 112039 | |||| || | | || | || ||||||||||||| || || ||| | || Sbjct 85606 TAACAAGAGACCAGGTGCCTTTGCCTTGTACATTGAGCCATGGCATGCCGACATCTTCGA 85665 Query 112040 GTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTC 112099 ||| |||| | | || || ||| | || || | | | ||| | ||| | Sbjct 85666 CTTCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATTAGAGCCAGAGATTTGTTCCC 85725 Query 112100 CGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCT 112159 ||| | ||||| |||||| | |||||| | ||||| || ||| ||||| | | Sbjct 85726 AGCTTTATGGATCCCAGATTTGTTCATGCAAAGAGTCGAAAAGAACCAAGATTGGACCTT 85785 Query 112160 CTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCT 112219 || | |||| | | || || ||| | |||| | ||||| ||||| || | Sbjct 85786 GTTCTCTCCAAATGAAGCTCCAGGTTTAGCCGAGGTTTACGGTGATGAGTTCATTGCTTT 85845 Query 112220 CTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG-ATGTGT 112278 ||| || |||||| ||||| | || | | || || | || | | | ||| Sbjct 85846 GTACGAGAAATACGAGAAAGAAGGCCGTGGTAGACAAACTGT-CAAGGCCCAGAAATTGT 85904 Query 112279 GGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACG 112338 || | | ||| | || ||||||| ||||| ||||| |||| ||| | |||||||| | Sbjct 85905 GGTACTCCATTTTGGAGGCTCAAACTGAGACCGGTACTCCATTCATGTTGTACAAAGATG 85964 Query 112339 CCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTA 112398 | |||||| | |||| || |||||||| |||||| | |||||| ||| ||| | ||| Sbjct 85965 CTTGTAACAAGAAGACCAACCAAAAGAACTTGGGTATTATCAAGTCTTCTAACTTGTGTT 86024 Query 112399 CAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCG 112458 || || | |||| | | ||| || || || || || |||||| | || || || | Sbjct 86025 GTGAGATTGTCGAATATTCTGACCCTGAAGAAACAGCCGTTTGTAACTTGGCCTCTATTG 86084 Query 112459 CTCTCCCCAAGTATGTGGATCCAGA----GACAAA--GACATTTGATTATGAAAAACTCC 112512 | | || | ||| || || || ||| | | | | ||| || | | Sbjct 86085 CCTTACCTGCCTTTGTAGAAGATGATGGTGAAAAATCGTGGTACAACTTTGAGAAGTTGC 86144 Query 112513 ACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACC 112572 ||||| || | || || || | |||| | |||| | ||||| ||||| | |||| Sbjct 86145 ACGAAATTGCCAAGTTGGTTACTAGAAACTTGAACAAGATCATTGACAGAAACTACTACC 86204 Query 112573 CCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAG 112632 | ||||| ||||| | |||||||| |||| || | ||||||| || |||||||||| Sbjct 86205 CAGTTGAAACTGCCAGAAAATCTAACATGAAGAACAGACCAATTGCCCTTGGTGTCCAAG 86264 Query 112633 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 112692 || | || ||| ||||| | | | || || || | || || |||||| Sbjct 86265 GTTTGGCCGATACTTTCATGAAGTTCAGAGTTGGTTTCGACTCTGTTGAGGCCAAGGAAT 86324 Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGG 112752 | || | || || ||||| || || ||||| ||| | ||| ||| || |||| Sbjct 86325 TGAACATTCAAATCTTCGAGACCATCTACCACGCTGCTGTCGAGCAAAGTATCGAATTGG 86384 Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC 112812 | |||||| |||||||| || | ||||| ||||||||||| ||||| | | | Sbjct 86385 CCATGGTTGAAGGTCCATACCCAAGTTACGAGGGATCTCCAGCTTCTCAAGGTTTATTAC 86444 Query 112813 AATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACTACGACTGGGACGCTCTCAAGGAA 112871 |||| ||| ||||||| | || |||| | | | |||||||| | ||||| Sbjct 86445 AATTCGATTTGTGGGACAGAAAG-CCAACCGACTTGTGGGACTGGGATCTGTTGAAGGAG 86503 Query 112872 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931 | | || | ||| | | ||| | | ||| | || ||||||||||| || || Sbjct 86504 AGATTAGCTAAGCACGGTATGAGAAACTCTTTGTTGGTTGCTCCAATGCCAACTGCTTCT 86563 Query 112932 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCT 112990 || | |||||||||||| | || ||||| || || || ||||| | ||||| || ||| Sbjct 86564 ACTTCTCAAATCTTGGGTTACAACGAATGTTTCGAGCCGTACACTTCTAACATTTACTCT 86623 Query 112991 GAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-CTCGTGGA-TGACCTC 113048 |||||| | || || || || ||||||||| ||| || || | || | Sbjct 86624 -AGAAGAGTGTTGGCCGGTGAATTCCAAATTGTCAAC--CCATACTTGTTAAGAGATTTG 86680 Query 113049 AAAGAGATTGGTCTCTGGTCCAAGGATATGAAG---GATCTCA-TGGTGAAAGCGGGTGG 113104 || | || | ||| | | |||||| || ||| | || | | || Sbjct 86681 GTTGATTTGGGATTGTGGAACGACTCCATGAAGAACCATATCATTTCCGATAAC----GG 86736 Query 113105 TTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTG 113164 || |||||||| | | || ||||||||| | ||||| | ||| || ||||| Sbjct 86737 ATCTATTCAAAACTTGCCAAACATCCCAGATGAATTGAAGAAAATCTACAAGACCGTTTG 86796 Query 113165 GGAA----ATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTG 113220 |||| |||| ||| ||||||||||||| || || |||||| || ||||| Sbjct 86797 GGAATTGTCTCAA----AAGACCATCATTGACATGGCTGCCGACCGTGGTGCCTACATTG 86852 Query 113221 ATCAAAGTCAAAGTATGAATCTATTCATGGAAAG--TCCAACGATGTCCAAGCTCTCTTC 113278 ||||| |||| | |||| ||||||| ||| ||||| ||| ||| | | Sbjct 86853 ATCAATCTCAATCTTTGAA--TATTCATATCAAGGCCCCAACTATGGGTAAGTTGACCAG 86910 Query 113279 TATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 ||||||| | ||| |||||||||||||| | || || || ||||| ||| Sbjct 86911 TATGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACCGGTATGTACTAC 86959 >seq4 Length=1221263 Score = 100 bits (110), Expect = 4e-16 Identities = 147/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || |||||||||| | |||| || || |||||| ||| ||| | || Sbjct 1137429 GCCATCGAGACTATTCCATGTATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAAT 1137370 Query 102159 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 102217 |||| | ||| || || | |||| || | | || ||||| ||||| |||||||| Sbjct 1137369 GACAAGGACGCTTTG-TTCGGTGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTT 1137311 Query 102218 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 |||| ||||||||| ||| |||| | ||| | |||||| ||||| | ||||||||| Sbjct 1137310 CTTCAGTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTT 1137252 Query 102277 TCTGCTTCTCCAACGAGCTTATC 102299 | |||||| |||||| | ||| Sbjct 1137251 TGACCTTCTCTAACGAGTTGATC 1137229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742314647920