Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 188 8e-43 >seq1 Length=2934271 Score = 188 bits (208), Expect = 8e-43 Identities = 1093/1742 (63%), Gaps = 39/1742 (2%) Strand=Plus/Minus Query 109501 TTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACAC 109560 |||| || ||||| ||||| ||| | |||||| || || |||||||| ||||| | Sbjct 86871 TTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCAATGATGGTC 86812 Query 109561 TTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACG 109620 ||||| | |||||| || |||||||| | ||||| | ||||| || |||| Sbjct 86811 TTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGGATGTTTGGC 86752 Query 109621 ATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATC---TCTTTCGACCAG 109677 | |||||||||||| || | | | || | | |||||| || ||| || | Sbjct 86751 AAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCGTTCCACAAT 86692 Query 109678 ---AGACCGACCTTTTTGAGATCG-TCAACAAG-ATGCTTGTTGACCACGACAAATTCAC 109732 | | | ||| | ||| | |||||| ||| |||||| | ||||||| Sbjct 86691 CCCAAATCAACC------AAATCTCTTAACAAGTATGG--GTTGACAATTTGGAATTCAC 86640 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 | || | | || ||| ||||||| ||||| || |||||||| || |||| | Sbjct 86639 CGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAAC 86580 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | | |||||| | ||| ||||| || ||||| ||||| | | | | ||||| | || Sbjct 86579 CCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATAC 86520 Query 109853 CCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCT 109912 | | | | || | ||| || ||||| || | || | | || | || Sbjct 86519 CGTGCTTAGCTAATCTCTCCTTCAACAGATCCCAGTC----CCACAAGTCGGTT--GGCT 86466 Query 109913 CACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCT 109972 | ||||||| ||| ||| | || ||| | || ||| ||||| |||| | |||| Sbjct 86465 TTCTGTCCCACAAATCGAATTGTAATAAACCTTGAGAAGCTGGAGATCCCTCGTAACTTG 86406 Query 109973 CGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAG 110032 ||| | || |||||| |||||| ||| ||| | || || || || || | Sbjct 86405 GGTATGGACCTTCAACCATGGCCAATTCGATACTTTGCTCGACAGCAGCGTGGTAGATGG 86346 Query 110033 TCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAA 110092 |||| || || ||| |||| | ||| || ||||||| || | | Sbjct 86345 TCTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAACAGAGTCGAAACCAACTCTGAACT 86286 Query 110093 GAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAG 110152 || || ||| || | ||| || ||||| || |||| || | | ||||||||||| Sbjct 86285 TCATGAAAGTATCGGCCAAACCTTGGACACCAAGGGCAATTGGTCTGTTCTTCATGTTAG 86226 Query 110153 AGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCG 110212 | || |||||||| || ||||| |||| | ||| |||| | || | || | | Sbjct 86225 ATTTTCTGGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATGATCTTGTTCAAGTTTCTAG 86166 Query 110213 TCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACG-----TTTTCGTCTCCTT 110267 | || ||| | ||||| || | || || | | | || ||||| | | | Sbjct 86165 TAACCAACTTGGCAATTTCGTGCAACTTCTCAAAGTTGTACCACGATTTTTCACCATCAT 86106 Query 110268 ATTG-ACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGT 110326 || ||| | || | |||||||| || | || || || | || || || || Sbjct 86105 CTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGGGT 86046 Query 110327 CGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCT 110386 | | ||||| | ||| || ||||||||| ||| ||| || | |||||||||||| | Sbjct 86045 CAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTTCTTTT 85986 Query 110387 GATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCT 110446 | || | || ||| || ||||| || || | |||| |||| ||||| || || || | Sbjct 85985 GGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTCAGTTT 85926 Query 110447 GTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT 110506 | | || | ||||| | ||| | | ||| ||||||| || | | |||| Sbjct 85925 GAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTGACAGTTTGTCTACCACGGCCTT 85866 Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566 | | |||||| || |||||| | || || | ||||| || || | | ||| Sbjct 85865 CTTTCTCGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGCTAAACCTG 85806 Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACA 110626 || | | ||| |||| | || ||||| | || || || || | |||||||| Sbjct 85805 GAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACA 85746 Query 110627 GGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT 110686 || || ||||| | || | ||| | || | | | | ||||| | ||| || | Sbjct 85745 AATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGAT 85686 Query 110687 TGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746 | | | || | ||||| | ||| || | |||||||| || | || | || | Sbjct 85685 TCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAAGGCAA 85626 Query 110747 TGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGA 110800 || || ||| || ||| |||| || || || || ||| ||||||| Sbjct 85625 AGGCACCTGGTCTCTTGTTACCACCT---TGGTCGACGTAACGAGCAGTGTTGTTGAAGA 85569 Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTAT 110860 | || | ||| |||||||| || | ||| ||| || ||||| ||| || | Sbjct 85568 CTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACCAG 85509 Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 |||| | ||||| ||||||||||| |||||||||||| || ||| ||| |||| Sbjct 85508 TGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGCAC 85449 Query 110921 ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGC 110980 ||||| | | || |||||||||| || || ||||| |||| |||||| || || | Sbjct 85448 ACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAAAC 85389 Query 110981 AAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGA 111040 |||||||||| || || | || || || || ||||| | || || | ||||| ||| Sbjct 85388 AAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGA 85329 Query 111041 ACAGACCT-TGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGA 111099 | | || | |||| | |||| || || |||| | | | | |||||| Sbjct 85328 A-ATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTCGATGTTATCACCGTGG 85270 Query 111100 ATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACA 111159 | ||||||||| |||| ||| || || ||| || ||||| | || || || | Sbjct 85269 ACACCAATGGCGACTCTCATATTCAAATGTTGTGGTCTTTCGGCAACTTTACCGTCGATC 85210 Query 111160 CGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGA 111219 | | | ||| |||| | |||||||| ||||||||| | | | ||||||||| Sbjct 85209 CTCAACAAATAAGATCTCTCCATGGTCTTGAAACCAAAGTAGTTATAGTTGAAATCACGG 85150 Query 111220 TC 111221 || Sbjct 85149 TC 85148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975919015800