Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 233 2e-56 seq8 91.5 2e-13 >seq1 Length=2934271 Score = 233 bits (258), Expect = 2e-56 Identities = 1113/1745 (64%), Gaps = 39/1745 (2%) Strand=Plus/Minus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655 |||||||| |||||||| | || | ||||| |||| | |||||| | | ||| Sbjct 86958 TAGTACATACCGGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTA 86899 Query 105656 GACATCGTTGGA--CTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGAC 105713 ||| ||||| ||| ||||| | |||| | |||| || |||||| || || Sbjct 86898 CCCATAGTTGGGGCCTTGATATGAATA--TTCAAAGATTGAGATTGATCAATGTAGGCAC 86841 Query 105714 CACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGAT----TTCCCACACTGTGCGG 105769 |||| | || ||||| ||||||| ||| |||| |||||| || || | Sbjct 86840 CACGGTCGGCAGCCATGTCAATGATGGTCTT----TTGAGACAATTCCCAAACGGTCTTG 86785 Query 105770 TAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTG 105829 |||| ||||| | ||||||||||| | || | |||||||| || || | Sbjct 86784 TAGATTTTCTTCAATTCATCTGGGATGTTTGGCAAGTTTTGAATAGATCCGTTATCGGAA 86725 Query 105830 ACCATGAGATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGA 105887 | || | | |||||| | | ||| | || |||| | | || || || | Sbjct 86724 ATGATATGGTTCTTCATGGAGTCGTTCCACAATCCCAAATCAACCAAATCTC-TTAACAA 86666 Query 105888 G-ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGT 105945 | ||| ||||||||| || || || || | |||||| ||| || ||||| | Sbjct 86665 GTATGG--GTTGACAATTTGGAATTCACCGGCCAACACTCTTCT-AGAGTAAATGTTAGA 86609 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| || || || ||||| || | |||||||||||| | || || || |||||||| Sbjct 86608 AGTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCAT 86549 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTT-TTCCTTGATGCGTTCCTTGAGAACAT 106064 ||| || | ||| | | ||| | | ||| | || | || | ||||| | | || Sbjct 86548 TGGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAAT-CTCTCCTTCAACAGAT 86490 Query 106065 CCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG 106123 ||||||| | | | |||| || | ||||||| ||| ||||| | | ||||| Sbjct 86489 CCCAGTCCCACAAGTCGGTTGGCTTT-CTGTCCCACAAATCGAATTGTAATAAACCTTGA 86431 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 || | ||||| ||||| | | || | ||||| | |||||||| || Sbjct 86430 GAAGCTGGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTCGATACTT 86371 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 ||| | | ||||| || ||||| || ||||| || |||| |||||||| ||| Sbjct 86370 TGCTCGACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTTGGCCTCA 86311 Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 | || || || | | | || || || ||| || | |||||| ||||| | Sbjct 86310 ACAGAGTCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGACACCAAGG 86251 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 |||| ||||||| ||| ||||| |||| ||||| ||||| || || | |||||| Sbjct 86250 GCAATTGGTCTGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTAGTAGTTTCTG 86191 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 ||||||| ||| | ||| | ||||| | ||| | ||||| || | || ||| | Sbjct 86190 TCAATGATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTTCTCAAAG 86131 Query 106424 T-----CAAAAGTGCGAGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAA 106477 | || | | | || || | ||| | || | ||| || || ||||| Sbjct 86130 TTGTACCACGATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAG 86071 Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || ||||| || || || || || | || || | ||| || ||||||||| ||| Sbjct 86070 TTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAA 86011 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 ||| || | ||||| ||||||||||| |||| ||||| || ||||| ||||| | | Sbjct 86010 GACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAAC 85951 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACAT-CGGCGGC 106656 ||| | || || || ||||| || || | || | ||| | | ||||| | | | | | Sbjct 85950 ATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCC 85891 Query 106657 TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTC 106716 | | ||| | | | || || || |||||| || ||| | || ||||| Sbjct 85890 TTG-ACAGTTTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTC 85832 Query 106717 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 106776 ||||| | |||| | |||||| || | | |||| |||| | | ||| | Sbjct 85831 ATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTG 85772 Query 106777 ACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCT 106836 || || || | | |||||| | ||||| ||||| | | || || | |||||| Sbjct 85771 GTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCT 85712 Query 106837 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 106896 | | ||||| | ||| || || || | |||| ||| || | ||| || || Sbjct 85711 GGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGC 85652 Query 106897 GTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTA 106952 ||||||||||||| || | || | | || || | | || | |||| | | Sbjct 85651 ATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACC-ACCTTGGTCGA 85593 Query 106953 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 107012 | || || || ||| ||| || || | || ||||||||||||||| | || ||| | Sbjct 85592 CGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGT 85533 Query 107013 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 107072 | || || ||| ||| | ||||||| | | ||||| |||| |||||||| | Sbjct 85532 TAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCAC 85473 Query 107073 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 107132 | || ||| || || |||||||| | | ||| |||| ||||| | ||| || | Sbjct 85472 CGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAAT 85413 Query 107133 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGA 107192 ||||||| |||| | |||||| ||| ||||| || || ||| |||||||| |||| Sbjct 85412 CCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGA 85353 Query 107193 AGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAG 107251 | | ||||| | || || |||| |||| | |||| | ||| || ||||| | | Sbjct 85352 ACAAAGTTGGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATGTTATAAGTCTCGATG 85294 Query 107252 ACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGT 107311 || || |||| || ||||||| || ||||| || | |||| || | ||| ||| Sbjct 85293 ACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCAAATGTTGTGGT 85234 Query 107312 GTTTC 107316 |||| Sbjct 85233 CTTTC 85229 >seq8 Length=648860 Score = 91.5 bits (100), Expect = 2e-13 Identities = 348/538 (65%), Gaps = 10/538 (2%) Strand=Plus/Plus Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||||| | |||||||||||| ||||||| ||| || ||||| ||| | | ||||| Sbjct 31688 TCCCAAAGATCAAATTGAAGTACCCCTTTTGACAGCGGGGAACCTTCATAAGAATCATAA 31747 Query 106154 GAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTC 106212 | ||| | | ||||| || | || | |||| || || ||||| || ||||| Sbjct 31748 GGACCGAATTCCTTGGCCAACTCGATAGAA-GTTTCCACGGCCGCATGATATATAGTTTC 31806 Query 106213 AAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAAT 106272 || || | ||||| | |||||| || || ||| || || ||| || || Sbjct 31807 GAAAATTTGGATATTCAATTTCTTGGCCTCTTCGGAAGTGAAAGCTATTCGGAGCATCAT 31866 Query 106273 AAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT 106332 ||| || |||||||||||||| || ||| | || || | ||| | || || || Sbjct 31867 GAATGTGTCAGCGAGACCTTGAACTCCTAAAGCTATTGGACGATGTTTGAGGTTGGAATT 31926 Query 106333 TCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAAC 106392 || || || |||||| || |||| || ||||| || | ||| |||| Sbjct 31927 CTTAGCTGTTTCTGTAGGATAATAAGTTCTATCTATGACCTTATTCAAATTACGAGTAAT 31986 Query 106393 AATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT-GACAT 106451 || || | ||| | ||||||| |||| ||| || ||| || || | Sbjct 31987 TATTTTGCACACCGAATGCAATTTTTCAAAATCGAAACCCAAAGAATCTCCAGAAGATGT 32046 Query 106452 -ACTTTGGAAGGGCG----ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 || || ||| | || |||||||| || || || ||||| | || ||||| Sbjct 32047 CACAAAGGCAGGCAACAGAACAGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGA 32106 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 || || | ||| || ||| || |||||| ||||| |||||||||||||||||||| Sbjct 32107 ATATTCAACAATCTCACAACATAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTT 32166 Query 106567 ACTCTTTTTG-TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 | ||| | || ||| ||| ||||||||||| | || || || ||||| |||| Sbjct 32167 -CGATTTCAGATTACACAGATCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTG 32223 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 107041 TCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTC 107100 ||| | || || || ||||| |||||||| || || || ||||| ||| ||||| Sbjct 32644 TCTGATATTGTGAATATGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTC 32703 Query 107101 CGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA--A 107158 | | || || || | || || | ||| || || ||||| | || | ||||||||| | Sbjct 32704 CTTGAGCGTATCAAAAATCCCCTCGATGGAATCATCCTTCATTGCCACAAGGAAGCATGA 32763 Query 107159 CTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAAC 107218 | | | ||| ||||| | ||||||| |||||| || || || || | || | ||| Sbjct 32764 CAGTAA--CTGGGGTCTCAGAGTACCAGAATTGAAAAGTGTAGGACTTCCATGTACGAAG 32821 Query 107219 ATACCTTGGGACATCTTGTCGTATGTCTCCAAGA-CAGAATCAATGTCTTC 107268 | || || ||||||| ||||| || || || | ||| ||||||||||| Sbjct 32822 AAACGTTTGGACATCAATTCGTAAGTTTCTAATATCAGG-TCAATGTCTTC 32871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980718877640