Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
seq4 183 3e-41
seq8 179 4e-40
>seq1
Length=2934271
Score = 201 bits (222), Expect = 1e-46
Identities = 458/683 (67%), Gaps = 6/683 (1%)
Strand=Plus/Minus
Query 48129 AATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAA 48188
|| ||||| || || || | |||| || ||| |||||| ||| | | ||| | ||||
Sbjct 85836 AACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAA 85777
Query 48189 TCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAA 48248
|| | | |||| ||||| ||| || | |||||| ||||| | |||| || |||
Sbjct 85776 TCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAA 85717
Query 48249 TCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATA 48308
|| || | ||| | |||||| || || |||| || | | |||| ||||| | ||
Sbjct 85716 TCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATG 85657
Query 48309 TCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGA 48368
|| ||||||||||| || | || | || | ||||||||| || ||||| |||||
Sbjct 85656 TCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGG 85597
Query 48369 TCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATA 48428
|| | || | ||||| ||||| | ||||| | |||||| | |||||| || || ||
Sbjct 85596 TCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTA 85537
Query 48429 CCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTAT 48487
|| || || || | ||| ||| ||| | ||||| || || || || || ||| ||
Sbjct 85536 CCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAA-ACCAAT 85478
Query 48488 ACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTAT 48547
|||||| || | || || || | |||||| ||| | || |||||||| ||||| ||
Sbjct 85477 ACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGAT 85418
Query 48548 ACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGA 48607
| ||| || |||| | || |||||| ||||||||| || || ||| || |
Sbjct 85417 AGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGC 85358
Query 48608 ATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTC 48667
|| || || |||||||| ||||| | || | ||| || |||| ||||| || ||
Sbjct 85357 GTTGAACAAAGTTGGAGAAGCATGGGTGAAATACTTCAAAGACAACATGTTATAAGTCTC 85298
Query 48668 AATAACAGAATCTAT-ATCCCATTGATGTATACCTATAGATACACGCATTAACATATATT 48726
|| || || || | || | || | ||| || | || | ||| || || ||
Sbjct 85297 GATGACCTTCTCGATGTTATCACCG-TGGACACCAATGGCGACTCTCATATTCAAATGTT 85239
Query 48727 GAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAA 48786
| |||||||| ||| ||| | || |||| | ||| ||| | |||| || || |
Sbjct 85238 GTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGGTCTTGA 85179
Query 48787 AACCAAAATAGTTGTA--TGAAA 48807
||||||| ||||| || |||||
Sbjct 85178 AACCAAAGTAGTTATAGTTGAAA 85156
Score = 89.7 bits (98), Expect = 6e-13
Identities = 163/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072
|||| || || |||||||| ||||| ||||| |||| || ||||| ||||||||
Sbjct 86967 GTTCTCAAGTAGTACATACCGGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTG 86908
Query 47073 GTTAATTTAGA-ATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131
|| || ||| ||| | || || | |||||||||| | ||||||| ||||||||
Sbjct 86907 GTCAACTTACCCATAGTTGGGGCCTTGA-TATGAATATTCAAAGATTGAGATTGATCAAT 86849
Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191
| ||||| | || || ||||| || | || | |||| | | ||||| || ||
Sbjct 86848 GTAGGCACCACGGTCGGCAGCCATGTCAATGATGGTCTTTTGAGACAATTCCCAAACGGT 86789
Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCC 47242
|| || |||| || | || ||||||| | || | | ||||||||||||||
Sbjct 86788 CTTGTAGATTTTCTTCAATTCATCTGGGATGTTTGGCAAGTTTTGAATAGATCC 86735
>seq4
Length=1221263
Score = 183 bits (202), Expect = 3e-41
Identities = 413/614 (67%), Gaps = 9/614 (1%)
Strand=Plus/Plus
Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011
|||| |||||| ||||| || || | || || |||||||| ||||| || |||||
Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244
Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071
|| || ||||| ||||| | ||||| || || |||||||| ||||||||||| || |||
Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304
Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131
||||| |||||||| || || ||||| ||||| | ||| || || | ||| ||
Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364
Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191
|| | || |||||| ||| ||||| || ||||||| || | |||||| || |||||
Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424
Query 19192 ATAGAATTAAATAGATACATACGC-TCATCTGTATCTTTAACATATGCATCTATCAATAA 19250
|| | ||| || | | | | || || | || ||| || | || | || ||||| ||
Sbjct 1137425 ATGGCATTGAACA-AGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAA 1137483
Query 19251 ACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGC 19310
| ||| | || || || || || || || || || || ||||| ||||| |
Sbjct 1137484 AGAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAG 1137543
Query 19311 TTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATC 19370
||| | | || || || | | || | || ||||| || || || || || || ||
Sbjct 1137544 TTCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTC 1137603
Query 19371 ACTAGCTGCAAAAAATGCTAATACATGTTTA-ATAAAATGTTTTTCATCTGAGGTTAA-- 19427
| || || || || || || || | | | || |||| | | || | || ||| |
Sbjct 1137604 AGAGGCGGCGAAGAAGGCCAAAAC-TCTGGAGATGAAATATCTCTCGT-TGTCGTTCAAC 1137661
Query 19428 --TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAA 19485
|| ||||| ||| | ||||| ||| ||| || | || || | ||||| ||||||
Sbjct 1137662 TTGGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAA 1137721
Query 19486 GCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAAT 19545
||||| || || || ||||| | ||| || || | || | || || || | || |||
Sbjct 1137722 GCCTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAAT 1137781
Query 19546 CTATTTTTATTTTC 19559
|| || || || ||
Sbjct 1137782 CTCTTCTTGTTCTC 1137795
>seq8
Length=648860
Score = 179 bits (198), Expect = 4e-40
Identities = 457/689 (66%), Gaps = 22/689 (3%)
Strand=Plus/Plus
Query 47885 AGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACA 47944
||| || | ||||||||| || ||| || || | ||||| | || ||| |||
Sbjct 32068 AGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACA 32127
Query 47945 TAGATTACCACATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCG 48002
|| ||| | |||| ||||| |||||||| | || || ||| | ||||
Sbjct 32128 TAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTTCGATTTCAGAT--TACACAGA 32185
Query 48003 TCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAA 48062
|| ||||| |||||||| || || || || || ||||| | ||| | ||| | |||
Sbjct 32186 TCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCAC 32245
Query 48063 ACAGTCCTAGCCTTTATAACAGCTCTAGCTTTA------TTATCATGTTCGTATTTAGTA 48116
| || ||| | || || | ||||| || |||| || ||| |||
Sbjct 32246 AATTTCTGAGCTCTGATTTGAGTCTTTGCTTTCCCCAGGTTTTCATATT----TTTCGTA 32301
Query 48117 TATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACAC 48176
| | |||| |||||| ||||| | | ||| || ||| |||||||||| |
Sbjct 32302 AAGAGCTTC--AAATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAG 32359
Query 48177 ATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCA-AAG 48235
| | ||| | ||||| | ||||| ||||||||| ||| || | ||| ||
Sbjct 32360 AAGAGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAAC 32419
Query 48236 AGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTC--A 48293
|| || |||||||||| ||| | ||| || || ||| ||| ||| | || |
Sbjct 32420 AGAGGGAAC-AAATCCCTAGCTCTAATTTCCTCTTTCCCATGATT--TTTACGGATCCCA 32476
Query 48294 AGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGT 48353
| || || | |||||| |||||||||||| ||||| | || || |||| ||||
Sbjct 32477 ATGAAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTC 32536
Query 48354 TTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACA 48413
||||||||||||||||||| ||||||||||| |||||| | ||||| ||||| |||| |
Sbjct 32537 TTATTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATA 32596
Query 48414 ATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTA 48473
|| ||||| || | ||||| || || || || |||| ||| | | ||| ||||| |
Sbjct 32597 ATCCCATTAGAGGTCCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGA 32656
Query 48474 ATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCA 48533
|| || || ||||| ||||| ||||||| || | || ||| || || ||||||
Sbjct 32657 ATATGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCA 32716
Query 48534 TAAATTCCTTCTATACTATCATCTATCAT 48562
|||| || || || |||||| ||||
Sbjct 32717 AAAATCCCCTCGATGGAATCATCCTTCAT 32745
Score = 118 bits (130), Expect = 1e-21
Identities = 425/663 (64%), Gaps = 8/663 (1%)
Strand=Plus/Plus
Query 47004 GCTGATTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAA 47063
|||| || || || | |||||||| || ||||| || || |||||||||| |||
Sbjct 31172 GCTGCTTGAGTCCGAAGGTAATACATTCCTGTCTTCAATCCCTTCTTCCATCCATAAAAA 31231
Query 47064 TGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTC 47123
|||||||| || || || || | |||| ||| |||| || || ||||| ||
Sbjct 31232 TGCATACTCGTCAACTTGGACAATGTAGGATCTTTCATATAGATGTTGAGAGACTGTGAT 31291
Query 47124 TGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCC 47183
|| || ||||||| ||||||||| |||||||||| | || | || || || |||
Sbjct 31292 TGGTCGATAAATGGGGATCTATCAGCAGCCATATCTACCACTACTTTCTGAGGAATTTCC 31351
Query 47184 CATACTGTTTTATAAATTTGTTTAATGTCTTCTGGGA----GATTAGTATTTTGAATAGA 47239
|| ||||||||||||| | ||||| | ||| || | | | | | || |||||
Sbjct 31352 CAAACTGTTTTATAAAGCTCCTTAATATATTCCGGAATCCCGTTCAAT-CCCTGGATAGA 31410
Query 47240 TCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaa 47299
||| |||| || || |||| | |||| || ||| | | | ||| ||
Sbjct 31411 TCCATTGTTTGAGATTATGAAACTTTTCACCTCATCTGTCCAGACTCCTAAATCAACCAA 31470
Query 47300 tgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATA 47359
| | || | || ||||||||| | || || || || | || | || | ||||
Sbjct 31471 GTCTCTCAATAAATAAGGATTAACGACCTGGAACTCACCGGCAAGAGCCCTTCTCGTATA 31530
Query 47360 TATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGC 47419
||||| ||| ||||| | | | ||| ||| || | || || | ||| ||
Sbjct 31531 GATATTGGAAGTAAGAGGTTCGAAACACTCACTATAACCGAGGATCTGGGAAGTCGACAG 31590
Query 47420 TGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNN 47479
|||||||| | || |||||||| ||||||| |||| | || | || |
Sbjct 31591 AGTAGGCATAGGCGCGACTAATAAAGAGTTTCTTAATCCAAACTTCT-TAAGTGAGTCTT 31649
Query 47480 NNNNNG-TTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAA 47538
| |||||||||||||||| || ||| | | ||||| |||| ||||||| |
Sbjct 31650 TAATTGAGGTCCAATCCCAAAGATCCGAAGGAGTAGTGTCCCAAAGATCAAATTGAAGTA 31709
Query 47539 TTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTT 47598
||||| | ||| ||||| | ||| | | |||||||||| || || || | |
Sbjct 31710 CCCCTTTTGACAGCGGGGAACCTTCATAAGAATCATAAGGACCGAATTCCTTGGCCAACT 31769
Query 47599 CACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCC 47658
| | | ||||| || || |||||| ||||| || |||| || || | ||| |
Sbjct 31770 CGATAGAAGTTTCCACGGCCGCATGATATATAGTTTCGAAAATTTGGATATTCA-ATTTC 31828
Query 47659 TTG 47661
|||
Sbjct 31829 TTG 31831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108722710040
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