Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 143 5e-29 >seq4 Length=1221263 Score = 143 bits (158), Expect = 5e-29 Identities = 421/638 (66%), Gaps = 18/638 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| | |||||||||||||| | || |||||||||||| |||||||| Sbjct 1137753 GAAATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGAC 1137694 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT--TC 25588 | ||||| || | |||| | | | || ||| | || |||| || Sbjct 1137693 TTAAGTAAGGATATCATTGACTGGAAGACCAAGTTGAACGACAACGAGAGATATTTCATC 1137634 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || || || ||||| ||||| || |||||||| ||||| || |||||||| || | Sbjct 1137633 TCCAGA--GTTTTGGCCTTCTTCGCCGCCTCTGACGGTATTGTCAACGAGAACTTGGTTG 1137576 Query 25649 AGAGATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707 ||| ||| | || || || | | || | |||||||||||||||||||| || Sbjct 1137575 AGAACTTCTCTGCCGAGGTTCAACTTCCTGAACTG-AAGTGTTTCTACGGTTTCCAAATT 1137517 Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGAC 25767 || || || | ||||||||| || | | | | || ||||| | || Sbjct 1137516 ATGATGGAGAACATCCACTCTGAGACTTACTCTTTGTTGATTGACACCTACATCAAGGA- 1137458 Query 25768 GTCGCCGAGAGAGAT--CGGCT-GTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824 || | || || | | || ||| |||||||||| || || | |||||| | Sbjct 1137457 -TC-CAAAGGAAGCTGACTTCTTGTTCAATGCCATCGAGACTATTCCATGTATCAAGGAG 1137400 Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTG 25884 ||||| ||||| ||| |||||||| | || |||| ||| || ||| | || Sbjct 1137399 AAGGCCGACTGGGCTTTGAGATGGATCAATGACAAGGACGCTTTGTTCGGTGAGAGATTG 1137340 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| || || || ||||| ||||| ||||| ||||| | ||||||||| Sbjct 1137339 GTTGCCTTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGTTCCTTTGCTTCTATCTTCTGG 1137280 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| ||| || ||||| || || ||| || |||||| | ||||| || || Sbjct 1137279 TTGAAGAAGAGAGGTTTAATGCCAGGTTTGACCTTCTCTAACGAGTTGATCAGTAGAGAT 1137220 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCT 26064 || ||| | |||| || |||||||| || | | | | |||||| | |||| || Sbjct 1137219 GAAGGTATGCACACCGACTTTGCCTGTTTGTTGTTC---GCTCACTTGAACAACAAGCCA 1137163 Query 26065 TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGT 26102 |||| ||||| ||| | | ||||| | |||||||| Sbjct 1137162 TCTCCAGAGATTGTCGAGAAGATCATTACCGAGGCTGT 1137125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844672283840