Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 167 5e-36
seq8 123 5e-23
>seq5
Length=1057341
Score = 167 bits (184), Expect = 5e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || ||||| |||||||| | || || ||| || || |||
Sbjct 899028 ATACCACCTCTCAATCTCAAAACTAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 899087
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| |||| |||| |||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 899088 GATAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGT 899147
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| ||||| || ||||| |||| || || |||||
Sbjct 899148 GGAATACCCTCTTTGTCTTGAATTTTGGACTTAACATTGTCAATAGTGTCAGAAGATTCA 899207
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | ||| || || |||||||| || || |||| ||| || |||||
Sbjct 899208 ACTTCCAAAGTGATAGTCTTACCAGTCAAAGTCTTAACAAAGATTTGCAT 899257
Score = 143 bits (158), Expect = 5e-29
Identities = 191/262 (73%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 192278 AGATATAGAGTATACTTTTTAGTTTAATAAT--ACCACCTCTAAGACGTAATACTAAATG 192335
|||| || | ||| || |||| ||| || ||| ||||| | | || ||||| ||
Sbjct 898769 AGATCTATATTATCTCTTCTAGTACAATTATTGACCTCCTCTTAATCTCAAGACTAAGTG 898828
Query 192336 TAAAGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTT 192394
| ||||| || ||| || || || |||||||| || |||| |||| |||||||| |
Sbjct 898829 AAGAGTAGATTCCTTTTGA-ATGTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGCT 898887
Query 192395 TACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 192454
||||||| || || ||||| ||||| |||||||| || || ||||| ||||| ||||||
Sbjct 898888 TACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGAATACCCTCTTTGTCTTGAATTTTAG 898947
Query 192455 TTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 192514
|| ||||| || | || || ||||| ||||| | ||| || || ||||||||||
Sbjct 898948 ACTTGACATTGTCAATGGTGTCGGAGGATTCAACTTCCAAAGTGATAGTCTTACCAGTTA 899007
Query 192515 ATGTTTTAATAAATATCTGCAT 192536
| ||||| | || || |||||
Sbjct 899008 AGGTTTTGACGAAGATTTGCAT 899029
Score = 141 bits (156), Expect = 2e-28
Identities = 177/243 (73%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || || || || | || || ||| || || ||
Sbjct 899484 ATACCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCG 899543
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| |||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 899544 GACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGT 899603
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || || || || || | || || |||||
Sbjct 899604 GGAATACCTTCCTTATCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAGGATTCA 899663
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATTAGAA 192546
|| || || ||||| || |||||||| | || |||| || || |||||| |||||||
Sbjct 899664 ACCTCAAGGGTAATAGTCTTACCAGTAAGAGTCTTAACGAAGATTTGCATTGTATTAGAT 899723
Query 192547 AAA 192549
|||
Sbjct 899724 AAA 899726
Score = 123 bits (136), Expect = 5e-23
Identities = 172/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||| ||||||||| | | || || || || ||||| | || || ||| |
Sbjct 274463 GTTCAATAACACCACCTCTCAATCTCAAAACCAAGTGCAAAGTGGATTCCTTTTGGATGT 274404
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || || || || |||| | || || ||||| |||||||||||||| ||||| ||||
Sbjct 274403 TGTAGTCGGACAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAGATCAATCTTTGTT 274344
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || ||||| || ||||| || || || || || |||| || |
Sbjct 274343 GGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATAGTGTCAG 274284
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
| ||||| ||||| | |||||||| ||||| || | || |||| || || ||||| |
Sbjct 274283 AAGATTCAACTTCCAAGGTAATGGTCTTACCTGTAAGGGTCTTAACGAAAATTTGCATCT 274224
Query 192539 T 192539
|
Sbjct 274223 T 274223
Score = 113 bits (124), Expect = 9e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||||||||| | | ||| || || || | |||| | |||| || || || || ||
Sbjct 899256 ATACCACCTCTCAATCTTAAGACCAAGTGAAGGGTAGATTCCTTTTGA-ATGTTGTAGTC 899314
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| || |||| | || || ||||| ||||||||||| || ||||| |||||||| ||
Sbjct 899315 AGACAAGGTTCTGCCGTCCTCTAATTGCTTACCAGCAAAAATCAATCTTTGTTGATCTGG 899374
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || ||||| || ||||| || ||| || ||||| || | || || || ||
Sbjct 899375 AGGAATACCTTCCTTGTCTTGAATCTTAGACTTAACATTGTCAATGGTGTCGGAAGACTC 899434
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || |||||||| ||||| || || || || | || || |||||
Sbjct 899435 AACCTCAAGGGTAATGGTCTTACCGGTCAAAGTCTTGACGAAAATTTGCAT 899485
>seq8
Length=648860
Score = 123 bits (136), Expect = 5e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || || || || || | ||| || ||| || || |||||
Sbjct 616581 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGACTCCTTTTGGATGTTGTAGTCAGA 616640
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| |||||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct 616641 CAAAGTTCTACCATCCTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 616700
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| || || || ||||| || || || || || || | || || ||||| ||
Sbjct 616701 GATACCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGATTCAAC 616760
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | |||||||| ||||| || || || |||| || || ||||| ||
Sbjct 616761 TTCCAAGGTAATGGTCTTACCTGTCAAAGTCTTAACGAAAATTTGCATCTT 616811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479861249850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |