Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 2e-30
seq8 136 1e-26
>seq1
Length=2934271
Score = 149 bits (164), Expect = 2e-30
Identities = 539/838 (64%), Gaps = 9/838 (1%)
Strand=Plus/Minus
Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646
||||||| |||| ||||| || || || || | ||| ||||| ||||||||||
Sbjct 86084 CAATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCAC 86025
Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706
| |||| ||||||| |||||| | || || ||||| ||||| | || |||||||||
Sbjct 86024 AACACAAGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAG 85965
Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766
|||| ||||| | ||| |||| || || ||||| | || || |||| ||| ||
Sbjct 85964 CATCTTTGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACC 85905
Query 155767 AGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCGACTCATATTTCATATAC 155825
| | | |||| || | | |||| | | |||||| ||| |||||| |||
Sbjct 85904 ACAATTTCTGGGCCTTGACA-GTTTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTAC 85846
Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAAC 155885
| | | | || ||||||||| || | || || | || || | |||
Sbjct 85845 AAAGCAATGAACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAAC 85786
Query 155886 AGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCCCAAATAG 155943
| | |||| || || | || || || ||| || | ||| ||| | ||
Sbjct 85785 AAGGTCCAATCTTGGTT--CTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAG 85728
Query 155944 CATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGA 156003
| ||| | || || || | || || | ||||||||||| | | || | ||
Sbjct 85727 CTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGA 85668
Query 156004 ATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG- 156062
| || || || | ||| |||||| | |||| ||||| ||| ||||||
Sbjct 85667 AGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGT 85608
Query 156063 --CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATAC 156120
||||| || || || || |||||||| || |||||||| | | ||| ||||||||||
Sbjct 85607 TACCACCTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATAC 85548
Query 156121 CATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATAT 156180
| |||||||| || || || ||| ||| | ||||||| | | || || || ||||
Sbjct 85547 CGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATAT 85488
Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240
| | ||||||||||| | || ||||| || || || || | ||| | |||
Sbjct 85487 GCAAACCAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAA 85428
Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300
||||||| |||||||| || | ||| | | || | || ||| | ||| || |||
Sbjct 85427 TACCTTCGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTG 85368
Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAAT 156360
| || ||||||||||| | || || | ||||| | |||||||| ||||| |
Sbjct 85367 GAGTACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAAATACTTCAAAGACAACATGT 85308
Query 156361 CGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCAT 156418
|| ||||| | | |||||| | ||| ||||| | || || | ||| |||||
Sbjct 85307 TATAAGTCTCGATGACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCAT 85250
Score = 100 bits (110), Expect = 8e-16
Identities = 103/134 (77%), Gaps = 3/134 (2%)
Strand=Plus/Minus
Query 301816 ATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAG 301875
||||| | || ||| |||||||| || ||||| ||| || | ||||||||||||
Sbjct 301018 ATTTCCTTAAGACGAGGAACACCTAATGTGACGTT---CTTAGAAGAAACACCAGCAAAA 300962
Query 301876 TGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATA 301935
||||||||||||| || | ||||||| ||| ||||||||| ||| || |||| | |
Sbjct 300961 TGGAAAGTATTCAAGGTCATCTGAGTAGCTGGTTCACCAATAGATTGAGCAGCAACGACA 300902
Query 301936 CCAACCATTTCTCC 301949
||||||||||| ||
Sbjct 300901 CCAACCATTTCACC 300888
Score = 95.1 bits (104), Expect = 4e-14
Identities = 199/293 (68%), Gaps = 4/293 (1%)
Strand=Plus/Minus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
||| ||| || ||| || ||||||| | ||| | |||||||| || |||||||| ||
Sbjct 300263 ATCGTAATGAACCATGATATCTTCCAAAGCCTTAACCAAACGACGTTGGATATAACCTGT 300204
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | || || || || ||||| |||| ||| |||||||| |||| || ||||||||
Sbjct 300203 TTCGGCAGTCTTAACGGCAGTATCGATTAAACCTTCACGACCAGCCATGGCGTGGAAGAA 300144
Query 302673 TAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730
| ||||| || || | || | ||| | | || ||||||||||||| | ||
Sbjct 300143 GAACTCTTGTGGA-GTCAAACCACGCAAGTACG-AGTTCTCAACGAAACCCTTGGATTCA 300086
Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790
|| || | || |||||| || || || | | || | | | ||| |||| |||
Sbjct 300085 GGTGAGTAATCATCCTTGGTGAAATGAGGTAACGATCTATCGGCGAAACCGAATGGAATA 300026
Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| || || |||||| |||| || || | || | | ||| || || |||||
Sbjct 300025 CGTTTACCTTCAACGATCTGTTGACCGACACAGGCAGACATTTGGGAGATATT 299973
>seq8
Length=648860
Score = 136 bits (150), Expect = 1e-26
Identities = 512/791 (65%), Gaps = 13/791 (2%)
Strand=Plus/Plus
Query 155588 AATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACA 155647
|| ||| |||| ||||||||| ||||||||||| || || ||||| |||||||||||
Sbjct 32065 AACAGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACA 32124
Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707
|| | || ||| || || || || |||||||| ||||| ||||| |||||
Sbjct 32125 ACATAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTTCGATTTCAGATTACACAG 32184
Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767
||| ||||| || || |||| || |||||||| ||||| || || | || |||
Sbjct 32185 ATCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCA 32244
Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CATATAC 155825
| | | || | ||||| | || | | || |||||||| | || |
Sbjct 32245 CAATTTCTGAGCTCTGATTTGAGTCTTTGCTTTCCCCAGGTTTTCATATTTTTCGTAAAG 32304
Query 155826 AGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAAC 155885
||| ||| | ||| || ||| | | || || | || || | ||
Sbjct 32305 AGC-TTCAA-ATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAGAAG 32362
Query 155886 AGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCA-AATAGC 155944
|| ||| |||| | | | || | | |||||||| |||| | |||| || ||
Sbjct 32363 AGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCACAACAG- 32421
Query 155945 ATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAA 156004
| ||| | ||||| || | ||||| | || ||||| || || | | | | |||
Sbjct 32422 AGGGAACAAATCCCTAGCTCTAATTTCCTCTTTCCCATGATTTTTACGGATCCCAATGAA 32481
Query 156005 TTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG-- 156062
|| ||||||| ||| ||| |||| ||||| || | | |||| |||||
Sbjct 32482 ATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTATT 32541
Query 156063 -CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121
|| || ||||||||||| | |||| || ||||| || | | ||| || ||||| ||
Sbjct 32542 ACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATCCC 32601
Query 156122 ATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGATGAGCGAACATTATGAATAT 156180
||| || || ||||| || || | || | | |||| || | | ||| |||||||
Sbjct 32602 ATTAGAGGTCCCATTAGTACCAGAGATGAAAC-TCCCAGTCGATCTGATATTGTGAATAT 32660
Query 156181 GTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAA 156240
| | ||||||||| |||| |||||| || ||||| ||||| | |||| ||||
Sbjct 32661 GCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAAA 32720
Query 156241 TACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTG 156300
| || || || |||||||| | ||||| | || |||| || ||| || ||||
Sbjct 32721 TCCCCTCGATGGAATCATCCTTCATTGCCACAAGGAAGCATGACAGTAACTGGGGTCTCA 32780
Query 156301 GTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATG-AATAAAATACTTATTAGACATATAA 156359
| || |||| ||||| |||||||| || |||| | || | || | || ||||| |
Sbjct 32781 GAGTACCAGAATTGAAAAGTGTAGGACTTCCATGTACGAAGAAACGT-TTGGACATCAAT 32839
Query 156360 TCGTATGTCTC 156370
||||| || ||
Sbjct 32840 TCGTAAGTTTC 32850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817392565707
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