Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-13
>seq1
Length=2934271
Score = 95.1 bits (104), Expect = 1e-13
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||||||||| || || |||| ||| ||||| | | ||| || | | ||||||||
Sbjct 85599 TGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAA 85540
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGT-GCGCGGCAAAGCC 1630184
||||| || || || | ||| | || | ||| | | |||| | ||||| ||
Sbjct 85539 GTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAA-CC 85481
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || ||||| | |||||| || | || |||| ||| | ||||| || || || ||
Sbjct 85480 AATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTC 85421
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| || || |||||||| | || || || || || || |||| ||||| | || ||
Sbjct 85420 GATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACC 85361
Query 1630305 GGCGTTGAA 1630313
||||||||
Sbjct 85360 AGCGTTGAA 85352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107138297288487
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |