Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 8e-12
seq1 89.7 8e-12
>seq5
Length=1057341
Score = 89.7 bits (98), Expect = 8e-12
Identities = 166/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| || |||||| || || ||||||||| |||||| ||| || |||
Sbjct 35045 GTACTTGGTGACAGCACGGGTACCTTCGGAAACGGCGTGCTTGGCCAATTCACCTGGCAA 34986
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||| | || || || |||||||| | || | ||| || |||||| || |
Sbjct 34985 GATCAATCTGACAGCAGTTTGGATCTCTCTGGCGGAGATGGTAGACTTCTTGTT-GTAAG 34927
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| | ||||||| |||| | || | || ||||| || || |||||||
Sbjct 34926 CAGCCAACTTGGAAGCCTCGGAAGCGATTCTCTCAAAGATATCGTTAACGAAGGAGTTCA 34867
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
||| ||||| || || | ||| || || ||| ||||| ||||| | |||||||
Sbjct 34866 AGATAGACATGGACTTTTGGGAAATACCAGTGTCTGGGTGAGTTTGCTTCAAAACCTTGT 34807
Query 1485710 A 1485710
|
Sbjct 34806 A 34806
>seq1
Length=2934271
Score = 89.7 bits (98), Expect = 8e-12
Identities = 166/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||| ||||| || ||||| |||||| |||||| ||| || |||
Sbjct 2101537 GTACTTGGTGACGGCACGAGTACCTTCGGAGACAGCGTGCTTGGCCAATTCACCTGGCAA 2101478
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||| | || || || |||||||| | || ||| ||| |||||| || |
Sbjct 2101477 GATCAATCTAACAGCAGTTTGGATCTCTCTGGCAGAGATGGTGGACTTCTTGTT-GTAAG 2101419
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| | ||||||| |||| | || | || ||||| || || |||||||
Sbjct 2101418 CAGCCAACTTGGAAGCCTCGGAAGCGATTCTTTCAAAGATATCGTTAACGAAGGAGTTCA 2101359
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
||| ||||| || || | ||| || || ||| ||||| ||||| | |||||||
Sbjct 2101358 AGATAGACATGGACTTTTGGGAAATACCAGTGTCTGGGTGGGTTTGCTTCAAAACCTTGT 2101299
Query 1485710 A 1485710
|
Sbjct 2101298 A 2101298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245229879829
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |