Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 8e-12 seq1 89.7 8e-12 >seq5 Length=1057341 Score = 89.7 bits (98), Expect = 8e-12 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| || |||||| || || ||||||||| |||||| ||| || ||| Sbjct 35045 GTACTTGGTGACAGCACGGGTACCTTCGGAAACGGCGTGCTTGGCCAATTCACCTGGCAA 34986 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| | || || || |||||||| | || | ||| || |||||| || | Sbjct 34985 GATCAATCTGACAGCAGTTTGGATCTCTCTGGCGGAGATGGTAGACTTCTTGTT-GTAAG 34927 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | ||||||| |||| | || | || ||||| || || ||||||| Sbjct 34926 CAGCCAACTTGGAAGCCTCGGAAGCGATTCTCTCAAAGATATCGTTAACGAAGGAGTTCA 34867 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 ||| ||||| || || | ||| || || ||| ||||| ||||| | ||||||| Sbjct 34866 AGATAGACATGGACTTTTGGGAAATACCAGTGTCTGGGTGAGTTTGCTTCAAAACCTTGT 34807 Query 1485710 A 1485710 | Sbjct 34806 A 34806 >seq1 Length=2934271 Score = 89.7 bits (98), Expect = 8e-12 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||| ||||| || ||||| |||||| |||||| ||| || ||| Sbjct 2101537 GTACTTGGTGACGGCACGAGTACCTTCGGAGACAGCGTGCTTGGCCAATTCACCTGGCAA 2101478 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| | || || || |||||||| | || ||| ||| |||||| || | Sbjct 2101477 GATCAATCTAACAGCAGTTTGGATCTCTCTGGCAGAGATGGTGGACTTCTTGTT-GTAAG 2101419 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| | ||||||| |||| | || | || ||||| || || ||||||| Sbjct 2101418 CAGCCAACTTGGAAGCCTCGGAAGCGATTCTTTCAAAGATATCGTTAACGAAGGAGTTCA 2101359 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 ||| ||||| || || | ||| || || ||| ||||| ||||| | ||||||| Sbjct 2101358 AGATAGACATGGACTTTTGGGAAATACCAGTGTCTGGGTGGGTTTGCTTCAAAACCTTGT 2101299 Query 1485710 A 1485710 | Sbjct 2101298 A 2101298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245229879829