Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 7e-23
seq8 104 2e-17
>seq5
Length=1057341
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| ||||| ||||| || || || ||||||||| | || ||| || |
Sbjct 899485 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACCATTACCCTTGAGGTTGAGTCTTCC 899426
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || |||||| || || ||||| | || |||||
Sbjct 899425 GACACCATTGACAATGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 899366
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| ||||| || | ||||||| || ||| || | |||||||||
Sbjct 899365 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCTGACTACAAC 899306
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||||||||| ||||| | ||| |||| || |||||| |||| ||
Sbjct 899305 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTAAGATTGAGAGGTGG 899259
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| || || || | ||||| || ||||||||| | ||| || ||
Sbjct 274223 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACCATTACCTTGGAAGTTGAATCT 274282
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| ||| | | | | || || ||||| || || ||||| | || ||
Sbjct 274283 TCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 274342
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || | ||||||| || ||| || | ||||||
Sbjct 274343 CAACAAAGATTGATCTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCCGACTAC 274402
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| |||||||| || || |||||| |||| ||||||||| |||| ||
Sbjct 274403 AACATCCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 274452
>seq8
Length=648860
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| || || ||||| ||||| || ||||||||| | ||| || ||
Sbjct 616811 AAGATGCAAATTTTCGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAAGTTGAATCT 616752
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| || | | | | || || ||||| || || || || | || ||
Sbjct 616751 TCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGAC 616692
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || ||||||| | | ||| || | ||||||
Sbjct 616691 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTAC 616632
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||||||||| || |||||| |||| ||||||||| |||| ||
Sbjct 616631 AACATCCAAAAGGAGTCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 616582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876746525579
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |