Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 8e-18
seq10 91.5 2e-13
seq1 86.0 8e-12
>seq9
Length=588574
Score = 105 bits (116), Expect = 8e-18
Identities = 178/255 (70%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406
||||| | || |||| ||||||||| | || || |||||| |||||||||||||
Sbjct 218707 ATTTTCTTCGGACCAATTTATTACCAAAAGTTGAAGCATATGGTTTTGGATAAAATGCAT 218766
Query 193407 GCTAGAAGTCATGGGC-AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCA 193465
|| ||| || ||| | ||| | ||| || ||||||| | | ||||||||
Sbjct 218767 GCCAGAGCTCGTGGTCCAAGAGCTGTCTTGACCA-GACAACCTACTGAAGGTCGTTCGAG 218825
Query 193466 AGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTAC 193525
|| ||| ||||| ||||| ||||||||||| | ||| ||| | | | |||| || |
Sbjct 218826 AGATGGTGGTTTGAGATTGGGAGAAATGGAGAGAGATTGTGTCATTGCTTATGGAGCCTC 218885
Query 193526 TCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCAC 193585
|||||| || || ||| | | ||| |||||||| || | || |||||||| |
Sbjct 218886 TCAATTGTTGTTGGAGAGATTAATGTTGAGTTCTGATCTGTTCGACGTTGATGTTTGTAA 218945
Query 193586 AGAATGTGGTATGAT 193600
||||||||| ||||
Sbjct 218946 CGAATGTGGTTTGAT 218960
>seq10
Length=492918
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219
|| |||||||||||||| || ||||| ||| | |||| ||| | ||||| |||
Sbjct 338473 ATCAAAGTTGCTCAATTGGCAGGTTATGTCAGTGAAAAGACAGGATATCACCATGGAGAA 338414
Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279
|| |||| | |||| || ||| || |||||||||||||| ||| | |||||| |
Sbjct 338413 CAGTCTTTAGTTCAAACAATCATTGGTTTGGCCCAAGATTTTGTCGGTTCCAATAATCTT 338354
Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339
|| ||| | ||| |||| || ||||||||| | || || |||||| | |
Sbjct 338353 TACTTGCTTAATCCTAATGGATGTTTCGGTACCAGAACAACTGGTGGAAAAGATGCCTCT 338294
Query 165340 GCATCAAGATATATTTATAC 165359
|| |||||||||||| |||
Sbjct 338293 GCTGCAAGATATATTTTTAC 338274
>seq1
Length=2934271
Score = 86.0 bits (94), Expect = 8e-12
Identities = 152/222 (68%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 171613 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 171672
||| | |||||| | ||| ||||| |||||| || ||||| || | ||| ||
Sbjct 113313 GAATTGTTATGGTTCATTGAAGGTAATACTGATGGTAAGAAATTATCCGAGAAAGGAGTC 113254
Query 171673 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 171732
|| ||||| | | || || || ||||||| || ||| | || || || | |||
Sbjct 113253 AAGATTTGGGAAGGGAACGGGTCACGTGAATACTTGGATAAGTTAGGTTTAACCCATAGA 113194
Query 171733 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792
| ||| |||||||| || || ||||||| || |||||||||||| || || ||||
Sbjct 113193 AGAGAGGGTGATTTGGGACCGGTTTATGGGTTCCAATGGAGACATTTCGGTGCCGAATAC 113134
Query 171793 ATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAA 171834
| || ||| || ||||| |||| |||||| ||||||
Sbjct 113133 AAAGATTGTGATCTGGATTATTCAGGTCAAGGATATGACCAA 113092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628531113576960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |