Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq9 105 8e-18 seq10 91.5 2e-13 seq1 86.0 8e-12 >seq9 Length=588574 Score = 105 bits (116), Expect = 8e-18 Identities = 178/255 (70%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 193347 ATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATGGTTAAGGATAAAATGCAT 193406 ||||| | || |||| ||||||||| | || || |||||| ||||||||||||| Sbjct 218707 ATTTTCTTCGGACCAATTTATTACCAAAAGTTGAAGCATATGGTTTTGGATAAAATGCAT 218766 Query 193407 GCTAGAAGTCATGGGC-AAGTGACTACTTTACATCGACAACCAAATTGTGGTCGTTCTCA 193465 || ||| || ||| | ||| | ||| || ||||||| | | |||||||| Sbjct 218767 GCCAGAGCTCGTGGTCCAAGAGCTGTCTTGACCA-GACAACCTACTGAAGGTCGTTCGAG 218825 Query 193466 AGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTATTTTAGTCCATGGTGCTAC 193525 || ||| ||||| ||||| ||||||||||| | ||| ||| | | | |||| || | Sbjct 218826 AGATGGTGGTTTGAGATTGGGAGAAATGGAGAGAGATTGTGTCATTGCTTATGGAGCCTC 218885 Query 193526 TCAATTCTTAAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCGATGTTTGCAC 193585 |||||| || || ||| | | ||| |||||||| || | || |||||||| | Sbjct 218886 TCAATTGTTGTTGGAGAGATTAATGTTGAGTTCTGATCTGTTCGACGTTGATGTTTGTAA 218945 Query 193586 AGAATGTGGTATGAT 193600 ||||||||| |||| Sbjct 218946 CGAATGTGGTTTGAT 218960 >seq10 Length=492918 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 || |||||||||||||| || ||||| ||| | |||| ||| | ||||| ||| Sbjct 338473 ATCAAAGTTGCTCAATTGGCAGGTTATGTCAGTGAAAAGACAGGATATCACCATGGAGAA 338414 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 || |||| | |||| || ||| || |||||||||||||| ||| | |||||| | Sbjct 338413 CAGTCTTTAGTTCAAACAATCATTGGTTTGGCCCAAGATTTTGTCGGTTCCAATAATCTT 338354 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 || ||| | ||| |||| || ||||||||| | || || |||||| | | Sbjct 338353 TACTTGCTTAATCCTAATGGATGTTTCGGTACCAGAACAACTGGTGGAAAAGATGCCTCT 338294 Query 165340 GCATCAAGATATATTTATAC 165359 || |||||||||||| ||| Sbjct 338293 GCTGCAAGATATATTTTTAC 338274 >seq1 Length=2934271 Score = 86.0 bits (94), Expect = 8e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 171613 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 171672 ||| | |||||| | ||| ||||| |||||| || ||||| || | ||| || Sbjct 113313 GAATTGTTATGGTTCATTGAAGGTAATACTGATGGTAAGAAATTATCCGAGAAAGGAGTC 113254 Query 171673 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 171732 || ||||| | | || || || ||||||| || ||| | || || || | ||| Sbjct 113253 AAGATTTGGGAAGGGAACGGGTCACGTGAATACTTGGATAAGTTAGGTTTAACCCATAGA 113194 Query 171733 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792 | ||| |||||||| || || ||||||| || |||||||||||| || || |||| Sbjct 113193 AGAGAGGGTGATTTGGGACCGGTTTATGGGTTCCAATGGAGACATTTCGGTGCCGAATAC 113134 Query 171793 ATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAA 171834 | || ||| || ||||| |||| |||||| |||||| Sbjct 113133 AAAGATTGTGATCTGGATTATTCAGGTCAAGGATATGACCAA 113092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531113576960