Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq8 161 2e-34 >seq8 Length=648860 Score = 161 bits (178), Expect = 2e-34 Identities = 432/654 (66%), Gaps = 25/654 (4%) Strand=Plus/Minus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || ||||| ||| | | ||| || |||||||| || || || |||| |||| | || || Sbjct 32763 TCATGCTTCCTTGTGGCAATGAAGGATGATTCCATCGAGGGGATTTTTGATACGCTCAAG 32704 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639 || || | || |||||||| | ||||| ||||| || || |||| |||| | Sbjct 32703 GAGTGCGCGATGATCTCTAAAAATGCAGGAGGTATTGGAATGCATATTCACAATATCAGA 32644 Query 110640 TCAAAAGG-AG---CAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAAT 110695 || | || || || | | | | | || || | || | ||| || | || || Sbjct 32643 TCGACTGGGAGTTTCATCTCTGGTA----CTAATGGGACCTCTAATGGGATTATCCCGAT 32588 Query 110696 GTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGG 110752 ||| ||||| |||||| | |||| | |||||| ||||||| ||||| |||| ||| Sbjct 32587 GTTGAGAGTGTTCAACAATGCTGCCAGATATGTAGATCAAGGAGGTAATAAGAGACCTGG 32528 Query 110753 CTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCG 110812 | | || | ||| | ||||| |||||| ||||| ||||| ||| | | | || Sbjct 32527 TGCTATCGCCGTGTATTTGGAACCATGGCATAATGATATTTTTGATTTCATTGGGATCCG 32468 Query 110813 TAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTC 110872 ||||||||| || || ||| ||||| | ||||| || | ||||| | | Sbjct 32467 TAAAAATCATGGGAAAGAGGAAATTAGAGCTAGGGATTTGTTCCCTCTGTTGTGGGTGCC 32408 Query 110873 AGATTTATTCATGAAACGTGTTCAAGAAAATGGC---ATGTGGTCTCTTATGTGTCCTCA 110929 |||||||| |||||| | || || || || | |||||| ||| | | |||| | Sbjct 32407 TGATTTATTTATGAAAAGAGTG--AGGAA-TGACCAAATGTGGAGTCTCTTCTCTCCTAA 32351 Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989 | |||| ||| |||| | |||||| || ||||||| |||||||||||||| Sbjct 32350 TGAAACTCCAGGTTTATCCAGTACTTATGGACTGGAATTTGAAGCTCTTTACGAAAAATA 32291 Query 110990 TGAAAAAGAAGGCAAGTTTCGCAAA----CAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045 |||||| || || ||||| ||||| |||||| || | |||| | | Sbjct 32290 TGAAAACCTGGGGAA----AGCAAAGACTCAAATCAGAGCTCAGAAATTGTGGTCCGCCA 32235 Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105 || | ||| | || | || || || ||||| | ||| | || ||||||| ||||| Sbjct 32234 TCTTAGAAGCGCAGATCGAGACAGGTACTCCATTTATGCTCTACAAAGATCTGTGTAATC 32175 Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 ||||| || |||| |||||| || || ||||| ||| ||||| || |||| Sbjct 32174 TGAAATCGAACCAAAAGAATTTGGGGACTATTAAATCTTCCAATTTATGTTGTG 32121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812632733571