Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 2e-34
>seq8
Length=648860
Score = 161 bits (178), Expect = 2e-34
Identities = 432/654 (66%), Gaps = 25/654 (4%)
Strand=Plus/Minus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| ||||| ||| | | ||| || |||||||| || || || |||| |||| | || ||
Sbjct 32763 TCATGCTTCCTTGTGGCAATGAAGGATGATTCCATCGAGGGGATTTTTGATACGCTCAAG 32704
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGC 110639
|| || | || |||||||| | ||||| ||||| || || |||| |||| |
Sbjct 32703 GAGTGCGCGATGATCTCTAAAAATGCAGGAGGTATTGGAATGCATATTCACAATATCAGA 32644
Query 110640 TCAAAAGG-AG---CAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAAT 110695
|| | || || || | | | | | || || | || | ||| || | || ||
Sbjct 32643 TCGACTGGGAGTTTCATCTCTGGTA----CTAATGGGACCTCTAATGGGATTATCCCGAT 32588
Query 110696 GTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGG 110752
||| ||||| |||||| | |||| | |||||| ||||||| ||||| |||| |||
Sbjct 32587 GTTGAGAGTGTTCAACAATGCTGCCAGATATGTAGATCAAGGAGGTAATAAGAGACCTGG 32528
Query 110753 CTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCG 110812
| | || | ||| | ||||| |||||| ||||| ||||| ||| | | | ||
Sbjct 32527 TGCTATCGCCGTGTATTTGGAACCATGGCATAATGATATTTTTGATTTCATTGGGATCCG 32468
Query 110813 TAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTC 110872
||||||||| || || ||| ||||| | ||||| || | ||||| | |
Sbjct 32467 TAAAAATCATGGGAAAGAGGAAATTAGAGCTAGGGATTTGTTCCCTCTGTTGTGGGTGCC 32408
Query 110873 AGATTTATTCATGAAACGTGTTCAAGAAAATGGC---ATGTGGTCTCTTATGTGTCCTCA 110929
|||||||| |||||| | || || || || | |||||| ||| | | |||| |
Sbjct 32407 TGATTTATTTATGAAAAGAGTG--AGGAA-TGACCAAATGTGGAGTCTCTTCTCTCCTAA 32351
Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989
| |||| ||| |||| | |||||| || ||||||| ||||||||||||||
Sbjct 32350 TGAAACTCCAGGTTTATCCAGTACTTATGGACTGGAATTTGAAGCTCTTTACGAAAAATA 32291
Query 110990 TGAAAAAGAAGGCAAGTTTCGCAAA----CAAATTCCAGCTCAAGAACTTTGGTTCAAAA 111045
|||||| || || ||||| ||||| |||||| || | |||| | |
Sbjct 32290 TGAAAACCTGGGGAA----AGCAAAGACTCAAATCAGAGCTCAGAAATTGTGGTCCGCCA 32235
Query 111046 TCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATC 111105
|| | ||| | || | || || || ||||| | ||| | || ||||||| |||||
Sbjct 32234 TCTTAGAAGCGCAGATCGAGACAGGTACTCCATTTATGCTCTACAAAGATCTGTGTAATC 32175
Query 111106 GCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
||||| || |||| |||||| || || ||||| ||| ||||| || ||||
Sbjct 32174 TGAAATCGAACCAAAAGAATTTGGGGACTATTAAATCTTCCAATTTATGTTGTG 32121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812632733571
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |