Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 131 4e-25 >seq5 Length=1057341 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || || |||||||||||||| ||| || ||||| | || Sbjct 899015 CAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCCGACACCATTGACAA 898956 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| || |||||||| ||||| || ||| || ||| |||||| | || || Sbjct 898955 TGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAACAAAGATTGATTTT 898896 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| ||||||||||| || |||||| | ||||||||| | || || || || Sbjct 898895 CGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAACATTCAAAAGGAATC 898836 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 |||||||||| | || |||||| Sbjct 898835 TACTCTTCACTTAGTCTTGAGA 898814 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||||||||||| ||| ||||||||| | || || ||| Sbjct 899233 ACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTTAAGTCC 899174 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || |||||||| ||||| || ||| || ||| |||||| | ||||| || || ||| Sbjct 899173 AAAATTCAAGACAAAGAGGGTATTCCACCTGACCAACAAAGATTAATCTTTGCTGGTAAG 899114 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || ||||| | || |||||| |||| || || || ||| | ||| Sbjct 899113 CAATTGGAAGATGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACAC 899054 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 899053 TTAGTTTTGAGA 899042 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || | || || ||| |||||||| | || Sbjct 899698 AAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGAATCCTCTGACACCATTGACAAC 899639 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 899638 GTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGATTAATCTTT 899579 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| || |||||| |||| |||||| |||| || || || Sbjct 899578 GCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCC 899519 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || | ||| | ||||||||| Sbjct 899518 ACCTTGCACTTGGTTTTGAGA 899498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820633437131