Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 4e-25
>seq5
Length=1057341
Score = 131 bits (144), Expect = 4e-25
Identities = 150/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || || |||||||||||||| ||| || ||||| | ||
Sbjct 899015 CAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCCGACACCATTGACAA 898956
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| || |||||||| ||||| || ||| || ||| |||||| | || ||
Sbjct 898955 TGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAACAAAGATTGATTTT 898896
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| ||||||||||| || |||||| | ||||||||| | || || || ||
Sbjct 898895 CGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAACATTCAAAAGGAATC 898836
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|||||||||| | || ||||||
Sbjct 898835 TACTCTTCACTTAGTCTTGAGA 898814
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 899233 ACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTTAAGTCC 899174
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|| |||||||| ||||| || ||| || ||| |||||| | ||||| || || |||
Sbjct 899173 AAAATTCAAGACAAAGAGGGTATTCCACCTGACCAACAAAGATTAATCTTTGCTGGTAAG 899114
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || ||||| | || |||||| |||| || || || ||| | |||
Sbjct 899113 CAATTGGAAGATGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACAC 899054
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 899053 TTAGTTTTGAGA 899042
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || || || | || || ||| |||||||| | ||
Sbjct 899698 AAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGAATCCTCTGACACCATTGACAAC 899639
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 899638 GTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACCTGACCAACAAAGATTAATCTTT 899579
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| || |||||| |||| |||||| |||| || || ||
Sbjct 899578 GCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCC 899519
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| | ||| | |||||||||
Sbjct 899518 ACCTTGCACTTGGTTTTGAGA 899498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820633437131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |