Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
>seq5
Length=1057341
Score = 127 bits (140), Expect = 2e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| || || ||||| || ||||| ||||| || || ||||| ||| || |
Sbjct 899029 ATGCAAATCTTCGTCAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 898970
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | | || || |||||| |||||||| || | || ||| |||
Sbjct 898969 GACACCATTGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 898910
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| || || || ||||| |||||| || |||| || |||||||||
Sbjct 898909 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 898850
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGATAATGAT 106494
|| ||||| |||||||| || || ||||| ||||| ||| ||||||| ||| ||
Sbjct 898849 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGAGGTCAATAAT 898795
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
|| ||||||||||| ||||| || | || || |||||||||||| ||||| ||| |
Sbjct 274223 AAGATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACCATTACCTTGGAAGTTGAATCT 274282
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
|| || ||| | | || || || || ||||| ||||| | || |||
Sbjct 274283 TCTGACACTATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 274342
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||||| | || | ||| || || |||||||| || | ||| || ||| |||
Sbjct 274343 CAACAAAGATTGATCTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCCGACTAC 274402
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||||| ||||| ||||| || | || || || ||||| || |||| ||
Sbjct 274403 AACATCCAAAAGGAATCCACTTTGCACTTGGTTTTGAGATTGAGAGGTGG 274452
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||||||||| || || || ||||| || |||||||||||| | || || | |
Sbjct 899485 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACCATTACCCTTGAGGTTGAGTCTTCC 899426
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
|| | ||| | | || || || ||| ||||| ||||| | || ||||||
Sbjct 899425 GACACCATTGACAATGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 899366
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| ||| || || |||||||| || | ||| || || ||||||
Sbjct 899365 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCTGACTACAAC 899306
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
|| ||||| |||||||| || || || || || || || |||| ||
Sbjct 899305 ATTCAAAAGGAATCTACCCTTCACTTGGTCTTAAGATTGAGAGGTGG 899259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402329546062688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |