Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-11 >seq1 Length=2934271 Score = 87.8 bits (96), Expect = 3e-11 Identities = 171/252 (68%), Gaps = 8/252 (3%) Strand=Plus/Plus Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 || || || || || || | ||| || | || || || || || | | |||||||| Sbjct 85352 TTCAACGCTGGTACTCCACACCCACAAATGTCTTCTTGTTTCCTTGTTGCCATGAAGGAG 85411 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 ||||| ||||| || || |||||||| | || |||| || | || |||||| | ||| Sbjct 85412 GATTCTATCGAAGGTATTTATGACACTTTGAAAGAGTGTGCCTTGATTTCCAAGACTGCC 85471 Query 260054 GGCGGCATCGGTTTTGCCGCA----CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGG 260109 || || || ||||| ||| ||||| | | ||| | || | ||| | || || Sbjct 85472 GGTGGTATTGGTTT----GCATATCCACAACATTAGAGCCACTGGTTCTTACATTGCCGG 85527 Query 260110 CACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCG 260169 || ||||| |||||||| || | || ||| || | || || ||| |||| || || Sbjct 85528 TACTAACGGTACTTCCAACGGTATTATTCCAATGGTTAGAGTCTTCAACAACACTGCTCG 85587 Query 260170 CTACGTCGACCA 260181 ||||||||||| Sbjct 85588 TTACGTCGACCA 85599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810139029782