Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1 217 2e-51 seq4 179 5e-40 seq8 156 6e-33 >seq1 Length=2934271 Score = 217 bits (240), Expect = 2e-51 Identities = 782/1209 (65%), Gaps = 32/1209 (3%) Strand=Plus/Minus Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 |||||||| ||| || | || | | ||||| | ||||| ||| | ||| | Sbjct 86070 TTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAA 86011 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 | |||||| | |||| || | || || |||| |||||||| || || ||||| | Sbjct 86010 GACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAAC 85951 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCA 69465 || || |||||||| || ||| | |||| || | ||| || | ||| | | || Sbjct 85950 ATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCC 85891 Query 69466 TTTATTACGGTCT-TGTAACGCTTC--TCTTTTTCATATTGT--GTATATAGCCGTTCGA 69520 || | | || | | || | | | ||||| || |||| ||| | ||| | || Sbjct 85890 TTGA---CAGTTTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAAT--GA 85836 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580 | ||||| || |||| || | || || ||| |||||||||| | | ||| | ||| Sbjct 85835 ACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCA-- 85778 Query 69581 CATCATCATCCTTA---ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGA 69637 ||| | | ||| |||| || ||| || | ||| || ||||| | |||| || | Sbjct 85777 -ATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACA 85719 Query 69638 GATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAA 69697 |||||||| |||| ||||||| || || ||| ||| | | || | || || | | Sbjct 85718 AATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGA 85659 Query 69698 TATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCT 69757 | || | ||||||||| || | || | || | | | || |||| || || || || | Sbjct 85658 TGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTT 85599 Query 69758 GATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATT 69817 | || | ||| | |||||||| || ||||||| | ||| ||||||||||| || || Sbjct 85598 GGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAG 85539 Query 69818 TACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTA 69877 |||| || || || | ||| ||| || | || | ||| || ||| | ||| | Sbjct 85538 TACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAA 85479 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || || | || || || | ||||| |||||| |||||||| ||||| || | Sbjct 85478 TACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGA 85419 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 | ||| || ||||| || ||| ||||| ||||||||| | ||| ||| || | Sbjct 85418 TAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAG 85359 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 | || || || || ||||| || || ||||| | || ||| | || || || || | Sbjct 85358 CGTTGAACAAAGTTGGAGAAGCATGGGTGAAATACTTCAAAGACAACATGTTATAAGTCT 85299 Query 70058 CAAT-AGCT----GATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACAT 70112 | || | || ||| ||| ||| | || | || || ||||| | ||| || Sbjct 85298 CGATGACCTTCTCGATGTTAT----CACCG-TGGACACCAATGGCGACTCTCATATTCAA 85244 Query 70113 ATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGT 70172 ||| || |||| ||| | |||| | || |||||| || ||| | |||| || Sbjct 85243 ATGTTGTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGGT 85184 Query 70173 TTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGT 70230 || || ||||| ||||| || ||||| || | || |||| || |||| |||| Sbjct 85183 CTTGAAACCAAAGTAGTTATAGTTGAAA--TCACGGTCATAAACGATGGCAGAGTTTAAC 85126 Query 70231 TTATCCTTATATTTGGTAACTATATCCATAACAGTAGGT-GAGATAATCGGAGATCGTTT 70289 | ||| || | || |||| |||| | | |||| || ||||| || Sbjct 85125 TCATCGGCATGAGCCATGACAATAT-CATAGGTTTCCTTGGAGACCATAGGAGAATGTAA 85067 Query 70290 ACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttt 70349 |||||| || || || ||||||||| ||||| | | |||||||| || ||| | Sbjct 85066 ACCATTCTTTGGGTTGACATAGTTGTATAAAGAGGCAACGACATCACTGAAACATTTGGT 85007 Query 70350 tGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409 |||| || || || || || ||||| |||||||| |||| || || ||||| || || Sbjct 85006 GGTTTGTTTATGCAAGTTAGAGATGGCGATTCTGGCGGCTAAGATGGCGTAGTCTGGGTG 84947 Query 70410 TTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAAC 70469 ||| || | ||| || | || || || || ||||||| || || || || || Sbjct 84946 GACTGTGGTCATATAAGCGGCGGTCTCGGCGGCCAAGTTATCTAACTCGATGGTGGTGAC 84887 Query 70470 TCCGTTATA 70478 || | ||| Sbjct 84886 ACCTTCATA 84878 Score = 159 bits (176), Expect = 5e-34 Identities = 325/482 (67%), Gaps = 3/482 (1%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||||| | || |||| || || | | |||||||||||||| |||| | Sbjct 86997 GTGAATTGAATGGCAGCAGAGGCGGCTTGAGTTCTCAAGTAGTACATACCGGTCTTCAAA 86938 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || |||| |||||||| |||||||| || | || | |||| | ||| Sbjct 86937 CCCTTCTTCCAACCGTAGAAGTGCATACTGGTCAACTTACCCATAGTTGGGGCCTTGATA 86878 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 |||||||||| |||||| |||||| ||| | || || | || || ||||| | || Sbjct 86877 TGAATATTCAAAGATTGAGATTGATCAATGTAGGCACCACGGTCGGCAGCCATGTCAATG 86818 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || ||||||||| | |||||||| ||||| | || | || | |||||||| | | Sbjct 86817 ATGGTCTTTTGAGACAATTCCCAAACGGTCTTGTAGATTTTCTTCAATTCATCTGGGATG 86758 Query 68614 CTCGTA---TTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | |||||||| ||||| |||||| || || ||||| || || ||| Sbjct 86757 TTTGGCAAGTTTTGAATAGATCCGTTATCGGAAATGATATGGTTCTTCATGGAGTCGTTC 86698 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 |||||| || ||| |||| | | | || || || ||||| ||||| || Sbjct 86697 CACAATCCCAAATCAACCAAATCTCTTAACAAGTATGGGTTGACAATTTGGAATTCACCG 86638 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | |||||||| | || |||||| ||| || || || || | | |||| || | ||| Sbjct 86637 GCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGGCTCGAAACATTCGTTGTAACCC 86578 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850 | ||||||| ||| || ||||||||||| || || ||||| ||| ||||| | ||| Sbjct 86577 AAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAACCAACAAAGAGTTTCTCATACCG 86518 Query 68851 TG 68852 || Sbjct 86517 TG 86516 >seq4 Length=1221263 Score = 179 bits (198), Expect = 5e-40 Identities = 404/603 (67%), Gaps = 8/603 (1%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| || ||||| ||||| || | || ||||||||||| || || |||||||| Sbjct 1137185 AACAACAAACAGGCAAAGTCGGTGTGCATACCTTCATCTCTACTGATCAACTCGTTAGAG 1137244 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | || ||||||| ||| | ||| || | ||| || || | |||||| || ||| Sbjct 1137245 AAGGTCAAACCTGGCATTAAACCTCTCTTCTTCAACCAGAAGATAGAAGCAAAGGAACCA 1137304 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 |||||||| ||||| || || ||||| ||||| | |||||| ||| | | || Sbjct 1137305 CTGAAGAAGATACCTTCAACGGCAGCAAAGGCAACCAATCTCTCACCGAACAAAGCGTCC 1137364 Query 39788 TT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || || ||||| || ||||| || || |||| ||| | ||| || || || || Sbjct 1137365 TTGTCATTGATCCATCTCAAAGCCCAGTCGGCCTTCTCCTTGATACATGGAATAGTCTCG 1137424 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || ||||| || | | | ||| | ||| || | || || || || |||| | Sbjct 1137425 ATGGCATTGAACAAGAAGTCAGCTTCCTTTGGATCCTTGATGTAGGTGTCAATCAACAAA 1137484 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || | || || |||||||| || ||| || || || ||||| ||||| | | Sbjct 1137485 GAGTAAGTCTCAGAGTGGATGTTCTCCATCATAATTTGGAAACCGTAGAAACACTTCAGT 1137544 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 |||| || ||| ||||| | | | || | || |||| || || || || || || ||| Sbjct 1137545 TCAGGAAGTTGAACCTCGGCAGAGAAGTTCTCAACCAAGTTCTCGTTGACAATACCGTCA 1137604 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTA-ATAAAATATTTTTCATCGGGTGTCAATT- 40082 ||||| || || ||||| || | | | || |||||| | || | | |||| | Sbjct 1137605 GAGGCGGCGAAGAAGGCCAAAAC-TCTGGAGATGAAATATCTCTCGTTGTCGTTCAACTT 1137663 Query 40083 --TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGC 40140 | ||||||||| ||||||| || || || | || || || ||||| || || || Sbjct 1137664 GGTCTTCCAGTCAATGATATCCTTACTTAAGTCAATCTCCTCGGCGGTCCAGAAAGAAGC 1137723 Query 40141 CTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 ||| ||||| |||||||| | ||| || || | || | ||||| || | || ||||| Sbjct 1137724 CTCGGCCTTCTTGTACATTTGCCAGATTTCGTGGTACTTGATTGGGAACAAGACGAATCT 1137783 Query 40201 ATT 40203 || Sbjct 1137784 CTT 1137786 >seq8 Length=648860 Score = 156 bits (172), Expect = 6e-33 Identities = 458/693 (66%), Gaps = 26/693 (4%) Strand=Plus/Plus Query 69274 ACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTA 69333 ||||| || | |||||| || || ||| || || || ||||| | ||||| | Sbjct 32066 ACAGAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAA 32125 Query 69334 CATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTG-TTACAGGC 69392 |||| ||| | |||| |||||||||| ||| | || || | ||| | ||||| Sbjct 32126 CATAAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTT-CGATTTCAGATTACACAG 32184 Query 69393 GTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA 69452 || ||||| || ||||| |||||||| || || ||||| | ||| | || | ||| Sbjct 32185 ATCTTTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCA 32244 Query 69453 AACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT----TTTTCATATTGT--GT 69506 | | ||| | ||| ||||| |||| | |||||||||| | || Sbjct 32245 CAATTTCTGAGCTCTGATTTGAGTCTTT----GCTTTCCCCAGGTTTTCATATTTTTCGT 32300 Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAA--ACATCATCCAATCCAGGACATTCATTTGGA 69564 | | ||| ||| ||||| ||| || || || || || ||| |||||| ||| Sbjct 32301 AAAGAGC--TTCAAATTCCAGTCCATAAGTACTGGAT--AAACCTGGAGTTTCATTAGGA 32356 Query 69565 CACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCA- 69623 | | | ||||| | |||| | | |||| ||||||||||| ||| || | ||| Sbjct 32357 GAGAAGAGACTCCACATTTGGTCATTCCTCACTCTTTTCATAAATAAATCAGGCACCCAC 32416 Query 69624 AAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAG-AT 69682 || || || | ||| || | |||| |||| || || || || |||||| | || Sbjct 32417 AACAGAGGGAACAA-ATCCCTAGCTCTAATTTCCTCTTTCCC---ATGATTTTTACGGAT 32472 Query 69683 CGAGA--AACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGG 69740 | | || || | ||||||| |||||||||||| | ||| | || || | || || Sbjct 32473 CCCAATGAAATCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGG 32532 Query 69741 TCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGG 69800 || ||||| ||||| ||||||| |||||||||| || || | ||||||| |||||| Sbjct 32533 TCTCTTATTACCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGG 32592 Query 69801 AATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATT 69860 ||||| |||||||| | ||||| || ||||| || |||| || | | | ||||| Sbjct 32593 GATAATCCCATTAGAGGTCCCATTAGTACCAGAGATGAAACTCCCAGTCGATCTGATATT 32652 Query 69861 ACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGT 69920 |||| | || || |||||||| |||||||||| | || || || | || Sbjct 32653 GTGAATATGCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGT 32712 Query 69921 GTCATATATACCCTCTATGCTATCATCTATCAT 69953 ||| | || ||||| ||| |||||| |||| Sbjct 32713 ATCAAAAATCCCCTCGATGGAATCATCCTTCAT 32745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908705550040