Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 224 1e-53 seq8 102 1e-16 >seq1 Length=2934271 Score = 224 bits (248), Expect = 1e-53 Identities = 907/1416 (64%), Gaps = 21/1416 (1%) Strand=Plus/Minus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| || ||||| || | |||||| ||| ||||| | ||||| || Sbjct 86659 GTTGACAATTTGGAATTCACCGGCCAACACTCTTCTAGAGTAAATGTTAGAAGTGTACGG 86600 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 || || ||||| || | |||||||||||| | || || || ||||||||||| || | Sbjct 86599 CTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATTGGAGCAAC 86540 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 110847 ||| | | ||| | | ||| | || | | ||||| | | ||||||||| | Sbjct 86539 CAACAAAGAGTTTCTCATACCGTGCTTAGCTAATCTCTCCTTCAACAGATCCCAGTCCCA 86480 Query 110848 GTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAG 110906 | | |||| || | ||||||| || || || | | ||||| || || |||| Sbjct 86479 CAAGTCGGTTGGCTTT-CTGTCCCACAAATCGAATTGTAATAAACCTTGAGAAGCTGGAG 86421 Query 110907 AACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGG 110966 | ||||| | || || | ||||| | |||||||| || ||| | | Sbjct 86420 ATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTCGATACTTTGCTCGACAG 86361 Query 110967 ATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAA 111026 ||||| || ||||| || ||||| || |||| |||||||| ||| | || || | Sbjct 86360 CAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTTGGCCTCAACAGAGTCGA 86301 Query 111027 ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTC 111086 | | | | || || || ||| || | |||||| ||||| | |||| |||| Sbjct 86300 AACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGACACCAAGGGCAATTGGTC 86241 Query 111087 TGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTC 111146 ||| ||| ||||| |||| ||||| ||||| || || | ||||||||||||| Sbjct 86240 TGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTAGTAGTTTCTGTCAATGATCT 86181 Query 111147 GGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAAT-----CAAA 111201 ||| | ||| | ||||| | ||| | ||||| || | || ||| | | || Sbjct 86180 TGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTTCTCAAAGTTGTACCACG 86121 Query 111202 AGTGCGAGTC-TCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 111260 | | | || || | ||| | || | ||| || || ||||| || ||||| | Sbjct 86120 ATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAATAGAGGCCAAGTTACAAACGG 86061 Query 111261 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCG 111320 | || || || || | || || | ||| || ||| ||||| ||| ||| || Sbjct 86060 CTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAA 86001 Query 111321 TCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 111380 | ||||| ||||||||||| |||||||||| || ||||| ||||| | |||| | || | Sbjct 86000 TACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAG 85941 Query 111381 TCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATG 111439 | || ||||| || || | | | ||| | | ||| || || | | || | ||| | Sbjct 85940 TACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATTTCTGGGCCTTG-ACAGTT 85882 Query 111440 GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 111499 | | || || || |||||| || ||| | || ||||| ||||| Sbjct 85881 TGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAA 85822 Query 111500 GCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCT-- 111557 | |||| | |||||| || | | |||| |||| | | ||| | | ||| | Sbjct 85821 ACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGGTCCAAT--CTTGGTTCTTTT 85764 Query 111558 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAG 111617 | || | | |||||| | ||||| ||||| | | || || | |||||| | | Sbjct 85763 CGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAA 85704 Query 111618 CCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATG 111677 ||||| | ||| || || || | |||| ||| || | ||| || || ||||||| Sbjct 85703 TTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATG 85644 Query 111678 GCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGC 111733 |||||| || | || | | || || | | || | |||| | || || || Sbjct 85643 GCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACC-ACCTTGGTCGACGTAACGA 85585 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || ||| ||| || || | || ||||||||||||||| | || ||| || || || Sbjct 85584 GCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCG 85525 Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 111853 ||| ||| | ||||||| | | ||||| |||| |||||||| || || | Sbjct 85524 GCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAACCAATACCACCGGCAGTC 85465 Query 111854 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 111913 || || || |||||||| | | ||| |||| ||||| | ||| || |||||||| Sbjct 85464 TTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTC 85405 Query 111914 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 111973 |||| | |||||| ||| ||||| || || ||| |||||||| ||||| | ||| Sbjct 85404 ATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTACCAGCGTTGAACAAAGTT 85345 Query 111974 GGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATC 112032 || | || || |||| |||| | |||| | ||| || ||||| | ||| || Sbjct 85344 GGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATGTTATAAGTCTCGATGACCTTCTC 85286 Query 112033 AATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 |||| || ||||||| || || ||||| | ||| Sbjct 85285 GATGTTATCACCGTGGACACCAATGGCGACTCTCAT 85250 >seq8 Length=648860 Score = 102 bits (112), Expect = 1e-16 Identities = 521/814 (64%), Gaps = 25/814 (3%) Strand=Plus/Plus Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || |||||||| || || || ||||| | || ||||| || || | ||| || |||| Sbjct 32069 GAAGCCAAATTACATACGGCAGTCTCCTTCTCATCTGAATATTCAACAATCTCACAACAT 32128 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 || |||||| ||||| |||||||||||||||||||| ||| || ||| ||| Sbjct 32129 AAATTGGAAGATTTAATAGTCCCCAAATTCTTTTGGTTCGATTTCAGATTACACAGATCT 32188 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AAC 111420 ||||||||||| | || || || ||||| |||| | || | || || ||| || Sbjct 32189 TTGTAGAGCATAAATGGAGTACCTGTCTCGATCTGCGCTTCTAAGATGGCGGACCACAAT 32248 Query 111421 ATCGGCG-GCTGGTACAATGGCGTTGGCCCGTCCCTCCG-CCTCGTACTTTGTGTAGAGG 111478 || | | ||| | | | | ||| | |||| | || || ||| ||| || Sbjct 32249 TTCTGAGCTCTGATTTGA-GTCTTTG--CTTTCCCCAGGTTTTCATATTTTTCGTAAAGA 32305 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 |||||||| ||| || | ||| | |||||| | | | ||| |||| ||| Sbjct 32306 GCTTCAAATTCCAGTCCATAAGTACTGGATAAACCTGGAGTTTCATTAGGAGAGAAGAGA 32365 Query 111539 GACCA---TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 111595 ||| ||| || |||||| || | ||||| || | || || | ||||| Sbjct 32366 CTCCACATTTGGTCA--TTCCTC-ACTCTTTTCATAAATAAATCAGGCACCCACAACAGA 32422 Query 111596 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 111655 | || | ||| ||| | | || || | || || || || | | ||| ||| Sbjct 32423 GGGAACAAATCCCTAGCTCTAATTTCCTCTTTCCCATGATTTTTACGGATCCCAATGAAA 32482 Query 111656 TCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTC---GACGC 111712 || | ||||| |||||||| || | ||| || ||||||| || || | Sbjct 32483 TCAAAAATATCATTATGCCATGGTTCCAAATACACGGCGATAGCACCAGGTCTCTTATTA 32542 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 || |||||| |||||| | || | ||| || || | | ||| || ||||| ||| Sbjct 32543 CCTCCTTGATCTACATATCTGGCAGCATTGTTGAACACTCTCAACATCGGGATAATCCCA 32602 Query 111773 TCTGATTGACCATTTGTCCCCCGAATACGAGATT--TATTGGCTCTCACATCATGGATGT 111830 | || ||||| || || | | || | | | | | ||| | || || || | Sbjct 32603 TTAGAGGTCCCATTAGT--ACCAGAGATGAAACTCCCAGTCGATCTGATATTGTGAATAT 32660 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 |||| |||||||| || || || ||||| ||| |||||| | || || || | | Sbjct 32661 GCATTCCAATACCTCCTGCATTTTTAGAGATCATCGCGCACTCCTTGAGCGTATCAAAAA 32720 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCA--ACTGGACATCTGCGGTCT 111948 | || | ||| || || ||||| | || | ||||||||| || | | ||| ||||| Sbjct 32721 TCCCCTCGATGGAATCATCCTTCATTGCCACAAGGAAGCATGACAG--TAACTGGGGTCT 32778 Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTT 112008 | ||||||| |||||| || || || || | || | ||| | || || ||||||| Sbjct 32779 CAGAGTACCAGAATTGAAAAGTGTAGGACTTCCATGTACGAAGAAACGTTTGGACATCAA 32838 Query 112009 GTCGTATGTCTCCAAGA-CAGAATCAATGTCTTC 112041 ||||| || || || | ||| ||||||||||| Sbjct 32839 TTCGTAAGTTTCTAATATCAG-GTCAATGTCTTC 32871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031913645600