Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 210 3e-49 >seq1 Length=2934271 Score = 210 bits (232), Expect = 3e-49 Identities = 930/1457 (64%), Gaps = 43/1457 (3%) Strand=Plus/Minus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| || || || |||| |||||||||||| | || || || || ||||| Sbjct 86607 GTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATT 86548 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTCCTTGA---GAGC 118309 || || | | | ||| | | ||| | || ||||| | ||||| | || | Sbjct 86547 GGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAAT-CTCTCCTTCAACAGATC 86489 Query 118310 ---GTCCCA---GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 |||||| |||| |||| ||||| | |||| ||| ||| || || | | Sbjct 86488 CCAGTCCCACAAGTCG--GTTG-GCTTTCTGTCCC------ACAAATCGAATTGTAATAA 86438 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||||| || ||||| |||||||| | | ||||| || |||||| |||||||| Sbjct 86437 ACCTTGAGAAGCTGGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTC 86378 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | || ||||| || ||||| || || || || || || || |||| | |||| Sbjct 86377 GATACTTTGCTCGACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTT 86318 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 |||||| | || || || | | || | || || || ||| || | ||||||||| Sbjct 86317 GGCCTCAACAGAGTCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGAC 86258 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAA 118603 ||| ||| ||||||| | | |||| ||||| || | || || || || || || | Sbjct 86257 ACCAAGGGCAATTGGTCTGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTAGTA 86198 Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663 || || || || | | | || | ||| | || || | ||| | ||||| || | ||| Sbjct 86197 GTTTCTGTCAATGATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTT 86138 Query 118664 TTCGTAATCAAAACTGCGAGTCT-------CTTCATTGACATACTTAGGAAGGGCGATTG 118716 || | | | | ||| | | | || | ||| | ||| | ||| || | Sbjct 86137 CTCAAAGTTGTACCA-CGATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAATAG 86079 Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776 | |||| ||||| || | || || || |||| || || | ||| || |||| Sbjct 86078 AGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACA 86019 Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 118836 |||| ||| ||| || | |||||||||||||| || | ||| ||||||| ||||| | Sbjct 86018 AGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTT 85959 Query 118837 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT 118896 |||| | |||| |||| || || ||||| ||||| | || | ||| | | ||| | | Sbjct 85958 TGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATT 85899 Query 118897 -CGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | || | ||||| ||| || || || |||| |||||| || ||| | Sbjct 85898 TCTGGGCCTTG-ACAGT----TTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAA 85844 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 || ||||| ||||| |||| | | ||||| || | || ||| |||| | Sbjct 85843 AGCAATGAACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAA 85784 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 | ||| | || || || | | |||||| | ||||||||||| | || | Sbjct 85783 GGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGG 85724 Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131 ||| | ||| | | | |||||| | || ||||| | | || | ||||| Sbjct 85723 GAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTC 85664 Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--ACC 119188 | ||| || || ||||| || || | ||||| || | | ||| | | ||| Sbjct 85663 GAAGATGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACC 85604 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | | |||| || || | |||||| ||| || || | || ||||||||| ||||| | Sbjct 85603 ACCTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTT 85544 Query 119249 GGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 ||| || || || || ||| ||| | ||||||| | | |||||| |||| Sbjct 85543 GGAAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAA 85484 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 ||||||||| || || ||| || || || ||||| | | | || | || || || Sbjct 85483 ACCAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACC 85424 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428 ||||| || || |||| | || | ||||| || |||||||| || || || Sbjct 85423 TTCGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGT 85364 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGT 119487 |||||||||||| | |||||| | || ||| |||| |||| | |||| | ||| | Sbjct 85363 ACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATGTTAT 85305 Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547 | ||||| | ||| |||| || ||||| | ||| || | ||| | |||| || Sbjct 85304 AAGTCTCGATGACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCA 85245 Query 119548 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGG 119607 | ||| ||| |||| | |||| |||| |||| | ||| |||||| || Sbjct 85244 AATGTTGTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGG 85185 Query 119608 TCTTGAGACCAAAATAG 119624 |||||| |||||| ||| Sbjct 85184 TCTTGAAACCAAAGTAG 85168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435114965160