Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 3e-49
>seq1
Length=2934271
Score = 210 bits (232), Expect = 3e-49
Identities = 930/1457 (64%), Gaps = 43/1457 (3%)
Strand=Plus/Minus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
||||| ||||| || || || |||| |||||||||||| | || || || || |||||
Sbjct 86607 GTGTACGGCTCGAAACATTCGTTGTAACCCAAGATTTGAGAAGTAGAAGCAGTTGGCATT 86548
Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTT-TTCCCTAATGCGTTCCTTGA---GAGC 118309
|| || | | | ||| | | ||| | || ||||| | ||||| | || |
Sbjct 86547 GGAGCAACCAACAAAGAGTTTCTCATACCGTGCTTAGCTAAT-CTCTCCTTCAACAGATC 86489
Query 118310 ---GTCCCA---GTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363
|||||| |||| |||| ||||| | |||| ||| ||| || || | |
Sbjct 86488 CCAGTCCCACAAGTCG--GTTG-GCTTTCTGTCCC------ACAAATCGAATTGTAATAA 86438
Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423
|||||| || ||||| |||||||| | | ||||| || |||||| ||||||||
Sbjct 86437 ACCTTGAGAAGCTGGAGATCCCTCGTAACTTGGGTATGGACCTTCAACCATGGCCAATTC 86378
Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483
| || ||||| || ||||| || || || || || || || |||| | ||||
Sbjct 86377 GATACTTTGCTCGACAGCAGCGTGGTAGATGGTCTCGAAGATTTGAATGTTCAATTCCTT 86318
Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543
|||||| | || || || | | || | || || || ||| || | |||||||||
Sbjct 86317 GGCCTCAACAGAGTCGAAACCAACTCTGAACTTCATGAAAGTATCGGCCAAACCTTGGAC 86258
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAA 118603
||| ||| ||||||| | | |||| ||||| || | || || || || || || |
Sbjct 86257 ACCAAGGGCAATTGGTCTGTTCTTCATGTTAGATTTTCTGGCAGTTTCAACTGGGTAGTA 86198
Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663
|| || || || | | | || | ||| | || || | ||| | ||||| || | |||
Sbjct 86197 GTTTCTGTCAATGATCTTGTTCAAGTTTCTAGTAACCAACTTGGCAATTTCGTGCAACTT 86138
Query 118664 TTCGTAATCAAAACTGCGAGTCT-------CTTCATTGACATACTTAGGAAGGGCGATTG 118716
|| | | | | ||| | | | || | ||| | ||| | ||| || |
Sbjct 86137 CTCAAAGTTGTACCA-CGATTTTTCACCATCATCTTCTACAAAGGCAGGTAAGGCAATAG 86079
Query 118717 ACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACA 118776
| |||| ||||| || | || || || |||| || || | ||| || ||||
Sbjct 86078 AGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACACA 86019
Query 118777 AGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 118836
|||| ||| ||| || | |||||||||||||| || | ||| ||||||| ||||| |
Sbjct 86018 AGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCTT 85959
Query 118837 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT 118896
|||| | |||| |||| || || ||||| ||||| | || | ||| | | ||| | |
Sbjct 85958 TGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAATT 85899
Query 118897 -CGGCAGCTGGCACAGTGGCGTTGGCT----CGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951
| | || | ||||| ||| || || || |||| |||||| || ||| |
Sbjct 85898 TCTGGGCCTTG-ACAGT----TTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAA 85844
Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011
|| ||||| ||||| |||| | | ||||| || | || ||| |||| |
Sbjct 85843 AGCAATGAACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAA 85784
Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071
| ||| | || || || | | |||||| | ||||||||||| | || |
Sbjct 85783 GGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGG 85724
Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131
||| | ||| | | | |||||| | || ||||| | | || | |||||
Sbjct 85723 GAACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTC 85664
Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCTTACGACG--ACC 119188
| ||| || || ||||| || || | ||||| || | | ||| | | |||
Sbjct 85663 GAAGATGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACC 85604
Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248
| | |||| || || | |||||| ||| || || | || ||||||||| ||||| |
Sbjct 85603 ACCTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTT 85544
Query 119249 GGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308
||| || || || || ||| ||| | ||||||| | | |||||| ||||
Sbjct 85543 GGAAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAA 85484
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
||||||||| || || ||| || || || ||||| | | | || | || || ||
Sbjct 85483 ACCAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACC 85424
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
||||| || || |||| | || | ||||| || |||||||| || || ||
Sbjct 85423 TTCGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGT 85364
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGT 119487
|||||||||||| | |||||| | || ||| |||| |||| | |||| | ||| |
Sbjct 85363 ACCAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAA-ATACTTCAAAGACAACATGTTAT 85305
Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
| ||||| | ||| |||| || ||||| | ||| || | ||| | |||| ||
Sbjct 85304 AAGTCTCGATGACCTTCTCGATGTTATCACCGTGGACACCAATGGCGACTCTCATATTCA 85245
Query 119548 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGG 119607
| ||| ||| |||| | |||| |||| |||| | ||| |||||| ||
Sbjct 85244 AATGTTGTGGTCTTTCGGCAACTTTACCGTCGATCCTCAACAAATAAGATCTCTCCATGG 85185
Query 119608 TCTTGAGACCAAAATAG 119624
|||||| |||||| |||
Sbjct 85184 TCTTGAAACCAAAGTAG 85168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435114965160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |