Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 277 2e-69 seq4 95.1 1e-14 seq8 87.8 2e-12 >seq1 Length=2934271 Score = 277 bits (306), Expect = 2e-69 Identities = 1111/1727 (64%), Gaps = 43/1727 (2%) Strand=Plus/Plus Query 104237 ATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 104296 ||| | || ||||| ||| | || || || |||| || ||| | ||||| || || Sbjct 85250 ATGAGAGTCGCCATTGGTGTCCACGGTGATAACATCGAGAAGGTCATCGAGACTTATAAC 85309 Query 104297 AAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 104355 | | |||| | |||| |||| || || | ||||| | ||||| |||||||| || Sbjct 85310 ATGTTGTCTTTGAAGTAT-TTCACCCATGCTTCTCCAACTTTGTTCAACGCTGGTACTCC 85368 Query 104356 AAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 104415 | || |||||||| ||| |||||| | |||| |||||||| || ||| | ||||| Sbjct 85369 ACACCCACAAATGTCTTCTTGTTTCCTTGTTGCCATGAAGGAGGATTCTATCGAAGGTAT 85428 Query 104416 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 104475 |||| ||| | | |||||||| || || ||| || || |||||||| |||| Sbjct 85429 TTATGACACTTTGAAAGAGTGTGCCTTGATTTCCAAGACTGCCGGTGGTATTGGTTTGCA 85488 Query 104476 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 104535 ||||| | | ||||||| | ||| ||| || || || ||| || | || Sbjct 85489 TATCCACAACATTAGAGCCACTGGTTCTTACATTGCCGGTACTAACGGTACTTCCAACGG 85548 Query 104536 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCG 104595 ||||||||||||| || | || || ||| ||| || || || || | |||| | || Sbjct 85549 TATTATTCCAATGGTTAGAGTCTTCAACAACACTGCTCGTTACGTCGACCAAGGT-GGTA 85607 Query 104596 TCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGT 104651 | | || || | | || | || ||||||||||||| || || ||| | || | Sbjct 85608 ACAAGAGACCAGGTGCCTTTGCCTTGTACATTGAGCCATGGCATGCCGACATCTTCGACT 85667 Query 104652 TCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCG 104711 || |||| | | || || ||| | || || | | | ||| | ||| | | Sbjct 85668 TCATTGACATCAGAAAGAATCACGGTAAGGAAGAAATTAGAGCCAGAGATTTGTTCCCAG 85727 Query 104712 CTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCT 104771 || | ||||| |||||| | |||||| | ||||| || ||| ||||| | | | Sbjct 85728 CTTTATGGATCCCAGATTTGTTCATGCAAAGAGTCGAAAAGAACCAAGATTGGACCTTGT 85787 Query 104772 TTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTT 104831 | | |||| | | || || ||| | |||| | ||||| ||||| || | | Sbjct 85788 TCTCTCCAAATGAAGCTCCAGGTTTAGCCGAGGTTTACGGTGATGAGTTCATTGCTTTGT 85847 Query 104832 ACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCG-ATGTGTGG 104890 || || |||||| ||||||| || | | || || | || | | | ||||| Sbjct 85848 ACGAGAAATACGAGAAAGAAGGCCGTGGTAGACAAACTGT-CAAGGCCCAGAAATTGTGG 85906 Query 104891 AAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCC 104950 | | ||| | || ||||||| ||||| ||||| |||| |||| | |||||||| || Sbjct 85907 TACTCCATTTTGGAGGCTCAAACTGAGACCGGTACTCCATTCATGTTGTACAAAGATGCT 85966 Query 104951 TGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACA 105010 |||||| | |||| || |||||||| |||||| | |||||| ||| || | ||| Sbjct 85967 TGTAACAAGAAGACCAACCAAAAGAACTTGGGTATTATCAAGTCTTCTAACTTGTGTTGT 86026 Query 105011 GAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCT 105070 || || | |||| | | ||| || || || || || |||||| | || || || || Sbjct 86027 GAGATTGTCGAATATTCTGACCCTGAAGAAACAGCCGTTTGTAACTTGGCCTCTATTGCC 86086 Query 105071 CTCCCCAAGTATGTGGATCCAGA----GACAAA--GACATTTGATTATGAAAAACTCCAC 105124 | || | ||| || || || ||| | | | | ||| || | ||| Sbjct 86087 TTACCTGCCTTTGTAGAAGATGATGGTGAAAAATCGTGGTACAACTTTGAGAAGTTGCAC 86146 Query 105125 GAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCC 105184 ||| || | || || || | |||| | |||| | ||||| ||||| | ||||| Sbjct 86147 GAAATTGCCAAGTTGGTTACTAGAAACTTGAACAAGATCATTGACAGAAACTACTACCCA 86206 Query 105185 GTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGT 105244 ||||| ||||| | |||||||| |||| || | ||||||| || ||||| || ||| Sbjct 86207 GTTGAAACTGCCAGAAAATCTAACATGAAGAACAGACCAATTGCCCTTGGTGTCCAAGGT 86266 Query 105245 CTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 105304 | || ||| ||||| | | | || || || | || || |||||| | Sbjct 86267 TTGGCCGATACTTTCATGAAGTTCAGAGTTGGTTTCGACTCTGTTGAGGCCAAGGAATTG 86326 Query 105305 AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCA 105364 || | || || |||||||| || ||||| ||| | ||| ||| || ||||| Sbjct 86327 AACATTCAAATCTTCGAGACCATCTACCACGCTGCTGTCGAGCAAAGTATCGAATTGGCC 86386 Query 105365 GAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAA 105424 |||||| |||||||| || | ||||| ||||||||||| ||||| | | ||| Sbjct 86387 ATGGTTGAAGGTCCATACCCAAGTTACGAGGGATCTCCAGCTTCTCAAGGTTTATTACAA 86446 Query 105425 TTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACTACGACTGGGAAGCTCTCAAGGAACG 105483 || ||| ||||||| | || |||| | | | |||||||| | ||||| | Sbjct 86447 TTCGATTTGTGGGACAGAAAG-CCAACCGACTTGTGGGACTGGGATCTGTTGAAGGAGAG 86505 Query 105484 CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCAC 105543 | || | ||| | | ||| | | | | |||||||||||||| || || || Sbjct 86506 ATTAGCTAAGCACGGTATGAGAAACTCTTTGTTGGTTGCTCCAATGCCAACTGCTTCTAC 86565 Query 105544 CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGA 105602 | |||||||||||| | || ||||| || || || ||||| | ||||| || ||| | Sbjct 86566 TTCTCAAATCTTGGGTTACAACGAATGTTTCGAGCCGTACACTTCTAACATTTACTCT-A 86624 Query 105603 GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-CTCGTGGA-TGACCTCAA 105660 ||||| | || || || || ||||||||| ||| || || | || | Sbjct 86625 GAAGAGTGTTGGCCGGTGAATTCCAAATTGTCAAC--CCATACTTGTTAAGAGATTTGGT 86682 Query 105661 AGAGATTGGTCTCTGGTCCAAGGATATGAAG---GATCTCA-TGGTGAAAGCGGGTGGTT 105716 || | || | ||| | | |||||| || ||| | || | | || | Sbjct 86683 TGATTTGGGATTGTGGAACGACTCCATGAAGAACCATATCATTTCCGATAAC----GGAT 86738 Query 105717 CCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGG 105776 | |||||||| | | || ||| ||||| | ||||| | ||| || ||||||| Sbjct 86739 CTATTCAAAACTTGCCAAACATCCCAGATGAATTGAAGAAAATCTACAAGACCGTTTGGG 86798 Query 105777 AA----ATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGAT 105832 || |||| ||| ||||||||||||| || || |||||| || ||||||| Sbjct 86799 AATTGTCTCAA----AAGACCATCATTGACATGGCTGCCGACCGTGGTGCCTACATTGAT 86854 Query 105833 CAAAGTCAAAGTATGAATCTCTTCATGGAAAG--TCCAACGATGTCCAAGCTCTCTTCTA 105890 ||| |||| | |||| | ||||| ||| ||||| ||| ||| | | || Sbjct 86855 CAATCTCAATCTTTGAA--TATTCATATCAAGGCCCCAACTATGGGTAAGTTGACCAGTA 86912 Query 105891 TGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 ||||| | ||| |||||||||||||| | || || || ||||| ||| Sbjct 86913 TGCACTTCTACGGTTGGAAGAAGGGTTTGAAGACCGGTATGTACTAC 86959 >seq4 Length=1221263 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || |||| ||||| | |||| || || |||||| ||| ||| | || Sbjct 1137429 GCCATCGAGACTATTCCATGTATCAAGGAGAAGGCCGACTGGGCTTTGAGATGGATCAAT 1137370 Query 94783 -ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTT 94841 |||| | ||| || || | |||| || | | || ||||| ||||| |||||||| Sbjct 1137369 GACAAGGACGCTTTG-TTCGGTGAGAGATTGGTTGCCTTTGCTGCCGTTGAAGGTATCTT 1137311 Query 94842 CTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 |||| ||||||||| ||| |||| | ||| | |||||| ||||| | ||||||||| Sbjct 1137310 CTTCAGTGGTTCCTT-TGCTTCTATCTTCTGGTTGAAGAAGAGAGGTTTAATGCCAGGTT 1137252 Query 94901 TCTGCTTCTCCAACGAGCTTATC 94923 | |||||| |||||| | ||| Sbjct 1137251 TGACCTTCTCTAACGAGTTGATC 1137229 >seq8 Length=648860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 104264 GAAGACATTGATTCTG-TCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCA 104322 ||||||||||| ||| | || || || ||||| ||||||| || || | ||| | || Sbjct 32871 GAAGACATTGA-CCTGATATTAGAAACTTACGAATTGATGTCCAAACGTTTCTTCGTACA 32813 Query 104323 CGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCA---AATGTCCAGTTGCTT 104379 | || || || || |||||| ||||||| | |||||||| | |||| ||||| Sbjct 32812 TGGAAGTCCTACACTTTTCAATTCTGGTACTCTGAGACCCCAGTTACTGTC---ATGCTT 32756 Query 104380 CCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGC 104439 |||| | || | ||||| || || ||| | || || | || || || | |||||| || Sbjct 32755 CCTTGTGGCAATGAAGGATGATTCCATCGAGGGGATTTTTGATACGCTCAAGGAGTGCGC 32696 Query 104440 GCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCA 104481 | ||||| || || || |||||||| ||||| || || Sbjct 32695 GATGATCTCTAAAAATGCAGGAGGTATTGGAATGCATATTCA 32654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260719801640