Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_028099.1
Length=122522
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=2934271
Score = 107 bits (118), Expect = 2e-18
Identities = 292/441 (66%), Gaps = 22/441 (5%)
Strand=Plus/Plus
Query 111696 AAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATG 111755
|| |||| |||||| ||| ||||||| ||||| ||||| |||||||| || |||
Sbjct 112750 AAACTGTTGTTGTAACAGCTCAATGTGATCCAAATACACATGAGCATCTCCCATGGTATG 112809
Query 111756 GATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTA 111815
|| || || | | | || | || || || ||||| | || | || | |||
Sbjct 112810 AATGAAATCTCCACAGTTCATATCACAACATTGAGCGATCATCTTGGTCAATAAAGCGTA 112869
Query 111816 ACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACA 111875
||||||||||| || || ||||| | |||||||| | ||||||||||||| |||
Sbjct 112870 GCTAGCAATGTTGAAAGGAACACCCAATCCCATATCACATGATCTTTGATATAATAAACA 112929
Query 111876 TGATA------GTTTATTT-----TGTGA----CACATAAAATTGACAAAGTACATGACA 111920
||| | |||| ||| || || |||||| |||||||| | |||||||||
Sbjct 112930 TGACAATTCCGGTTTCTTTCCCTCTGGGAAATTCACATAGAATTGACAGAATACATGACA 112989
Query 111921 AGGAGGCAATGCCATCCCATTCATAAAGGGT---CCCCATGCACACATGATCATCCTTCT 111977
|| || || |||||| | | ||| ||| |||| ||| || || || |
Sbjct 112990 TGGTGGTAAAGCCATCTGGGCGAAATCTGGTGGATTCCAAGCACTCATAATGATTCTACG 113049
Query 111978 GCTGTAGCGATTA-TGTTCAATGTCGTGTATGACATTCAAGAGCTGGTC-TATCCCTTTA 112035
| || ||||| | || || | ||| |||| | || ||||| ||| |||| |
Sbjct 113050 GTCATAAGGATTAGTCTTTAA-CTTGTGAATGATCTCTGCAAGTTGGTCATAT-CCTTGA 113107
Query 112036 CCAGTATAATCCGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCA 112095
|| | ||||||| | ||| | ||||| || || | |||||||||||||| |||
Sbjct 113108 CCTGAATAATCCAGATCACAATCTTTGTATTCGGCACCGAAATGTCTCCATTGGAACCCA 113167
Query 112096 TAAATAGGCCCCAGATCTCCC 112116
|||| || |||| ||| |||
Sbjct 113168 TAAACCGGTCCCAAATCACCC 113188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 391945547454793
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |