Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=2934271 Score = 107 bits (118), Expect = 2e-18 Identities = 292/441 (66%), Gaps = 22/441 (5%) Strand=Plus/Plus Query 111696 AAGCTGTAATTGTAAAGGCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATG 111755 || |||| |||||| ||| ||||||| ||||| ||||| |||||||| || ||| Sbjct 112750 AAACTGTTGTTGTAACAGCTCAATGTGATCCAAATACACATGAGCATCTCCCATGGTATG 112809 Query 111756 GATCAATTCCCAAGGCTCCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTA 111815 || || || | | | || | || || || ||||| | || | || | ||| Sbjct 112810 AATGAAATCTCCACAGTTCATATCACAACATTGAGCGATCATCTTGGTCAATAAAGCGTA 112869 Query 111816 ACTAGCAATGTTAAATGGCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACA 111875 ||||||||||| || || ||||| | |||||||| | ||||||||||||| ||| Sbjct 112870 GCTAGCAATGTTGAAAGGAACACCCAATCCCATATCACATGATCTTTGATATAATAAACA 112929 Query 111876 TGATA------GTTTATTT-----TGTGA----CACATAAAATTGACAAAGTACATGACA 111920 ||| | |||| ||| || || |||||| |||||||| | ||||||||| Sbjct 112930 TGACAATTCCGGTTTCTTTCCCTCTGGGAAATTCACATAGAATTGACAGAATACATGACA 112989 Query 111921 AGGAGGCAATGCCATCCCATTCATAAAGGGT---CCCCATGCACACATGATCATCCTTCT 111977 || || || |||||| | | ||| ||| |||| ||| || || || | Sbjct 112990 TGGTGGTAAAGCCATCTGGGCGAAATCTGGTGGATTCCAAGCACTCATAATGATTCTACG 113049 Query 111978 GCTGTAGCGATTA-TGTTCAATGTCGTGTATGACATTCAAGAGCTGGTC-TATCCCTTTA 112035 | || ||||| | || || | ||| |||| | || ||||| ||| |||| | Sbjct 113050 GTCATAAGGATTAGTCTTTAA-CTTGTGAATGATCTCTGCAAGTTGGTCATAT-CCTTGA 113107 Query 112036 CCAGTATAATCCGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCA 112095 || | ||||||| | ||| | ||||| || || | |||||||||||||| ||| Sbjct 113108 CCTGAATAATCCAGATCACAATCTTTGTATTCGGCACCGAAATGTCTCCATTGGAACCCA 113167 Query 112096 TAAATAGGCCCCAGATCTCCC 112116 |||| || |||| ||| ||| Sbjct 113168 TAAACCGGTCCCAAATCACCC 113188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391945547454793