Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq10 95.1 6e-15
>seq10
Length=492918
Score = 95.1 bits (104), Expect = 6e-15
Identities = 272/408 (67%), Gaps = 19/408 (5%)
Strand=Plus/Plus
Query 64883 GTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGT 64942
||||| |||| || |||||||| | | ||||| | | ||||| ||||| | ||||
Sbjct 338112 GTACTCCATCCAGTACCAATACCATCGGCTCCATTGACAAGGATCATTGGAATCACTGGT 338171
Query 64943 GCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATAC---TTCAAAATGGCA 64999
||| | || ||||| | | ||||||| | | |||| | ||| | |
Sbjct 338172 AAATACCATTCTGGTTCAACTGTCTGTTCATCATCTTGAACATACGAATACAACAG---A 338228
Query 65000 TCATCCTCTT--TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATC 65057
||||| || ||| ||||| | |||| ||| ||||||| |||| |||||||||
Sbjct 338229 TCATCGGCTGGATTG--AATATTAATGGAGTGATTGGGTTCAATTCAGTAAAAATATATC 338286
Query 65058 TTTCGGATGCGTGGTCTTGTCCA---GTTCGTCGTGTTCCAAACTGACCATTTGGCATTA 65114
|| | | | | |||| |||| ||| || || || || ||||| || ||||
Sbjct 338287 TTGCAGCAGAGGCATCTTTTCCACCAGTTGTTCTGGTACCGAAACATCCATTAGG-ATTA 338345
Query 65115 ATAAATTAAT-ATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTT 65173
| || ||| ||| || ||||| | ||||| || |||| || || |||| | | |
Sbjct 338346 AGCAAGTAAAGATTATTGGAACCGACAAAATCTTGGGCCAAACCAATGATTGTTTGAACT 338405
Query 65174 AAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCA 65233
||| | ||| || || |||||||||| | |||| |||||| || |||||||||
Sbjct 338406 AAAGACTGTTCTCCATGGTGATATCCTGTCTTTTCACTGACATAACCTGCCAATTGAGCA 338465
Query 65234 ACTTTTATTTCCGTTGTTAAA--TTCTTTTTAAATGCAGAATACAATA 65279
||||| || | |||| || || ||||||| ||| || ||||||||
Sbjct 338466 ACTTTGATCT-CGTTTTTCAAGTTTCTTTTGAAA-CAAGCATACAATA 338511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679968404150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |