Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01] 11 sequences; 11,653,826 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 6e-15 >seq10 Length=492918 Score = 95.1 bits (104), Expect = 6e-15 Identities = 272/408 (67%), Gaps = 19/408 (5%) Strand=Plus/Plus Query 64883 GTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGT 64942 ||||| |||| || |||||||| | | ||||| | | ||||| ||||| | |||| Sbjct 338112 GTACTCCATCCAGTACCAATACCATCGGCTCCATTGACAAGGATCATTGGAATCACTGGT 338171 Query 64943 GCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATAC---TTCAAAATGGCA 64999 ||| | || ||||| | | ||||||| | | |||| | ||| | | Sbjct 338172 AAATACCATTCTGGTTCAACTGTCTGTTCATCATCTTGAACATACGAATACAACAG---A 338228 Query 65000 TCATCCTCTT--TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATC 65057 ||||| || ||| ||||| | |||| ||| ||||||| |||| ||||||||| Sbjct 338229 TCATCGGCTGGATTG--AATATTAATGGAGTGATTGGGTTCAATTCAGTAAAAATATATC 338286 Query 65058 TTTCGGATGCGTGGTCTTGTCCA---GTTCGTCGTGTTCCAAACTGACCATTTGGCATTA 65114 || | | | | |||| |||| ||| || || || || ||||| || |||| Sbjct 338287 TTGCAGCAGAGGCATCTTTTCCACCAGTTGTTCTGGTACCGAAACATCCATTAGG-ATTA 338345 Query 65115 ATAAATTAAT-ATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTT 65173 | || ||| ||| || ||||| | ||||| || |||| || || |||| | | | Sbjct 338346 AGCAAGTAAAGATTATTGGAACCGACAAAATCTTGGGCCAAACCAATGATTGTTTGAACT 338405 Query 65174 AAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCA 65233 ||| | ||| || || |||||||||| | |||| |||||| || ||||||||| Sbjct 338406 AAAGACTGTTCTCCATGGTGATATCCTGTCTTTTCACTGACATAACCTGCCAATTGAGCA 338465 Query 65234 ACTTTTATTTCCGTTGTTAAA--TTCTTTTTAAATGCAGAATACAATA 65279 ||||| || | |||| || || ||||||| ||| || |||||||| Sbjct 338466 ACTTTGATCT-CGTTTTTCAAGTTTCTTTTGAAA-CAAGCATACAATA 338511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679968404150