Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 152 6e-32
seq8 82.4 8e-11
>seq1
Length=2934271
Score = 152 bits (168), Expect = 6e-32
Identities = 491/760 (65%), Gaps = 4/760 (1%)
Strand=Plus/Minus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
|| |||| ||| || ||||| || || || ||| |||| |||| || || |||
Sbjct 86079 GAGGCCAAGTTACAAACGGCTGTTTCTTCAGGGTCAGAATATTCGACAATCTCACAACAC 86020
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
|| ||||| |||||||| | || | |||||| |||||| |||||| |||||| || ||
Sbjct 86019 AAGTTAGAAGACTTGATAATACCCAAGTTCTTTTGGTTGGTCTTCTTGTTACAAGCATCT 85960
Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236
||||| ||||| | || || ||||||||| ||| || | || | || ||| |
Sbjct 85959 TTGTACAACATGAATGGAGTACCGGTCTCAGTTTGAGCCTCCAAAATGGAGTACCACAAT 85900
Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACC--GACCCTGTGCGACGTACGTCCGGTACAACT 79294
| | ||||| |||| || | |||| | || | | |||| || ||||||
Sbjct 85899 TTCTGGGCCTTGACAG--TTTGTCTACCACGGCCTTCTTTCTCGTATTTCTCGTACAAAG 85842
Query 79295 CGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGT 79354
| |||| | || || || || |||| | || || || | || | | || |
Sbjct 85841 CAATGAACTCATCACCGTAAACCTCGGCTAAACCTGGAGCTTCATTTGGAGAGAACAAGG 85782
Query 79355 GCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGA 79414
||| || | || ||| || || | | |||||| | || |||||||| | || | ||
Sbjct 85781 TCCAATCTTGGTTCTTTTCGACTCTTTGCATGAACAAATCTGGGATCCATAAAGCTGGGA 85722
Query 79415 AGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCA 79474
| | || | | | || || || | || || ||| | | || | ||||| |
Sbjct 85721 ACAAATCTCTGGCTCTAATTTCTTCCTTACCGTGATTCTTTCTGATGTCAATGAAGTCGA 85662
Query 79475 TGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGC 79534
||||||||| ||||| ||||| | || | ||| || | ||| | |||| || |
Sbjct 85661 AGATGTCGGCATGCCATGGCTCAATGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCAC 85602
Query 79535 CCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG 79594
| |||| |||||| || || ||||||||||| |||| | ||| || | || |||| ||
Sbjct 85601 CTTGGTCGACGTAACGAGCAGTGTTGTTGAAGACTCTAACCATTGGAATAATACCGTTGG 85542
Query 79595 CGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTC 79654
||||| || ||| || | ||| | || | |||||| | || | |
Sbjct 85541 AAGTACCGTTAGTACCGGCAATGTAAGAACCAGTGGCTCTAATGTTGTGGATATGCAAAC 85482
Query 79655 CGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCT 79714
| || || |||| |||||| || || ||||| || | || || || || || |
Sbjct 85481 CAATACCACCGGCAGTCTTGGAAATCAAGGCACACTCTTTCAAAGTGTCATAAATACCTT 85422
Query 79715 CGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTAC 79774
|||| || || |||||||| || || ||||| || ||||| ||||||| ||||
Sbjct 85421 CGATAGAATCCTCCTTCATGGCAACAAGGAAACAAGAAGACATTTGTGGGTGTGGAGTAC 85362
Query 79775 CGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT 79814
| |||||||| | || || | || || ||||| ||||
Sbjct 85361 CAGCGTTGAACAAAGTTGGAGAAGCATGGGTGAAATACTT 85322
Score = 114 bits (126), Expect = 1e-20
Identities = 152/211 (72%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249
|||| ||| |||||||| || ||||| | |||||||||||| ||||| | |||||||||
Sbjct 86967 GTTCTCAAGTAGTACATACCGGTCTTCAAACCCTTCTTCCAACCGTAGAAGTGCATACTG 86908
Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309
| || ||| ||| | | ||| || || || || | || || || || || |||
Sbjct 86907 GTCAACTTACCCATAGTTGGGGCCTTGATATGAATATTCAAAGATTGAGATTGATCAATG 86848
Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369
|| ||||| |||||||| |||||||| |||| | |||||| | | ||||| | ||||
Sbjct 86847 TAGGCACCACGGTCGGCAGCCATGTCAATGATGGTCTTTTGAGACAATTCCCAAACGGTC 86788
Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGT 78400
||| || ||||| || || ||||||
Sbjct 86787 TTGTAGATTTTCTTCAATTCATCTGGGATGT 86757
>seq8
Length=648860
Score = 82.4 bits (90), Expect = 8e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258
|| ||||| || ||||| | |||||||||||||| || | |||||||||| || ||||
Sbjct 31190 TAATACATTCCTGTCTTCAATCCCTTCTTCCATCCATAAAAATGCATACTCGTCAACTTG 31249
Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308
| || | || | | ||| |||||||||| ||||| || ||||||||
Sbjct 31250 GACAATGTAGGATCTTTCATATAGATGTTGAGAGACTGTGATTGGTCGAT 31299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548524724577840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |