Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nakazawaea_20peltata_20[genbank_20GCA_5F001599355.1_202016-03-01]
11 sequences; 11,653,826 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq5 158 1e-33
seq8 114 1e-20
seq1 102 9e-17
>seq5
Length=1057341
Score = 158 bits (174), Expect = 1e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || |||||||| | ||||| ||||| ||||| ||||||||||||||
Sbjct 899485 ATGCAAATTTTCGTCAAGACTTTGACCGGTAAGACCATTACCCTTGAGGTTGAGTCTTCC 899426
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||| ||||| |||||||| || ||||||||||| ||
Sbjct 899425 GACACCATTGACAATGTTAAGTCTAAGATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 899366
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | |||||||||||||||||| | ||||| | | ||| | | ||||| ||
Sbjct 899365 CAAAGATTGATTTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCTGACTACAAC 899306
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
| ||||||||||| || ||||| | |||||
Sbjct 899305 ATTCAAAAGGAATCTACCCTTCACTTGGTCTT 899274
Score = 150 bits (166), Expect = 2e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||| ||||| | || || |||||||| ||| | || ||||| || |
Sbjct 899257 ATGCAAATCTTTGTTAAGACTTTGACTGGTAAGACTATCACTTTGGAAGTTGAATCTTCT 899198
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | |||||||| ||||| ||||| ||||| || |||||
Sbjct 899197 GACACTATTGACAATGTTAAGTCCAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 899138
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | |||| ||||||||||||||| | || |||| | | || || | ||||| ||
Sbjct 899137 CAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCTGACTACAAC 899078
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||||| | || |||| |||
Sbjct 899077 ATCCAAAAGGAATCCACTTTACACTTAGTTTTG 899045
Score = 147 bits (162), Expect = 2e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 27399 TACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA 27458
|| || |||||||||||| || ||||| ||||| || ||||||||||| |||||||||||
Sbjct 899720 TAATACAATGCAAATCTTCGTTAAGACTCTTACTGGTAAGACTATTACCCTTGAGGTTGA 899661
Query 27459 GTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCC 27518
|| ||| | ||||| || | ||| | || || || || ||||| || ||||| ||
Sbjct 899660 ATCCTCTGACACCATTGACAACGTCAAGTCCAAGATCCAAGATAAGGAAGGTATTCCACC 899601
Query 27519 AGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGA 27578
||||| || | |||| ||||||||||||||| | || |||| | | || | | ||
Sbjct 899600 TGACCAACAAAGATTAATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGA 899541
Query 27579 CTATAATGTCCAAAAGGAATCCAC 27602
||| || ||||||||||||||||
Sbjct 899540 CTACAACATCCAAAAGGAATCCAC 899517
Score = 141 bits (156), Expect = 1e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| ||||| || | || || |||||||| ||| | || ||||| ||
Sbjct 899029 ATGCAAATCTTCGTCAAAACCTTAACTGGTAAGACTATCACTTTGGAAGTTGAATCCTCC 898970
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| |||||||||| ||||| ||||| ||||| || |||||
Sbjct 898969 GACACCATTGACAATGTCAAGTCTAAAATTCAAGACAAAGAGGGTATTCCACCTGACCAA 898910
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| |||||||||||| | || |||| | | || | | || || ||
Sbjct 898909 CAAAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 898850
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||||||||| |||||||| ||||||||
Sbjct 898849 ATTCAAAAGGAATCTACTCTTCACTTAGTCTTG 898817
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| ||||| || ||||| ||||| | || ||||| || |
Sbjct 274226 ATGCAAATTTTCGTTAAGACCCTTACAGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 274285
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || | ||| | || || || |||||||| || || || || |||||
Sbjct 274286 GACACTATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 274345
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | ||||| | | ||| | | ||||| ||
Sbjct 274346 CAAAGATTGATCTTTGCTGGTAAGCAATTAGAGGACGGCAGAACCTTGTCCGACTACAAC 274405
Query 27586 GTCCAAAAGGAATCCACT 27603
|||||||||||||||||
Sbjct 274406 ATCCAAAAGGAATCCACT 274423
>seq8
Length=648860
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| | || || ||||| ||||| | || ||||| || |
Sbjct 616808 ATGCAAATTTTCGTTAAGACTTTGACAGGTAAGACCATTACCTTGGAAGTTGAATCTTCT 616749
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| || | ||| | || || || ||||||||||| || || || |||||
Sbjct 616748 GACACCATTGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 616689
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||||||| | ||||||| | | || | | ||||| ||
Sbjct 616688 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAGGATGGTAGAACTTTGTCTGACTACAAC 616629
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| ||||| | || | ||||||
Sbjct 616628 ATCCAAAAGGAGTCCACCTTGCACTTGGTCTTG 616596
>seq1
Length=2934271
Score = 102 bits (112), Expect = 9e-17
Identities = 506/790 (64%), Gaps = 22/790 (3%)
Strand=Plus/Minus
Query 80883 CTTC-ACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCA 80940
|||| ||||| || || ||||| | || |||| || || ||||| |||||||
Sbjct 86105 CTTCTACAAAGGCAGGTAAGGCA-ATAGAGGCCAAGTTACAAACGGCTGTTTCTTCAGGG 86047
Query 80941 TCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTC 81000
|| | | | ||||| || || ||||| ||||||||||| || |||||| ||| ||
Sbjct 86046 TCAGAATATTCGACAATCTCACAACACAAGTTAGAAGACTTGATAATACCCAAGTTCTTT 85987
Query 81001 TGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACC 81060
||||| | ||| ||| ||||| || ||||| ||||| | || |||||||||||
Sbjct 85986 TGGTTGGTCTTCTTGTTACAAGCATCTTTGTACAACATGAATGGAGTACCGGTCTCAGTT 85927
Query 81061 TGTGACTTGAGGATGGCGTCCCA-AATCTCGCGCGCCTTGACCACCTTGCGGAATTTG-C 81118
|| | || | |||| || ||| ||| || | |||||||| | ||| | | |
Sbjct 85926 TGAGCCTCCAAAATGGAGTACCACAATTTCTGG-GCCTTGAC-AGTTTGTCTACCACGGC 85869
Query 81119 CTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGT 81178
|||| | | || || |||| | ||||| |||||| || || | |
Sbjct 85868 CTTCTTTCTCGTATTTCTCGTACAAAGCAATGAACTCATCACCGTAAACCTCGGCTAAAC 85809
Query 81179 CTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGA 81238
|||| || || || | | || | ||| || || || || || | |||||
Sbjct 85808 CTGGAGCTTCATTTGGAGAGAACAAGGTCCAATCTTGGTTCTTTTCGACTCTTTGCATGA 85749
Query 81239 AAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCT 81298
| || |||||||| | || | ||||| || | | | || || | ||| |
Sbjct 85748 ACAAATCTGGGATCCATAAAGCTGGGAACAAATCTCTGGCTCTAATTTCTTCCTTACCGT 85689
Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358
| || | | || | ||||| | |||||| |||||||||||||| | |||| ||
Sbjct 85688 GATTCTTTCTGATGTCAATGAAGTCGAAGATGTCGGCATGCCATGGCTCAATGTACAAGG 85629
Query 81359 CGATCG-AC-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412
| | | || | |||| | ||||| |||| ||||||||| ||||| ||| |
Sbjct 85628 CAAAGGCACCTGGTCTCTTGTTA---CCACCTTGGTCGACGTAACGAGCAGTGTTGTTGA 85572
Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472
| || | | ||| || || ||||| | || |||||| ||||| | || || |
Sbjct 85571 AGACTCTAACCATTGGAATAATACCGTTGGAAGTACCGTTAGTACCGGCAATGTAAGAAC 85512
Query 81473 CCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA 81531
| |||| | | ||| ||| || || ||| || ||||| | ||| ||||||
Sbjct 85511 CAGTGGCTCTAATGTTGTGGATATGCAA-ACCAATACCACCGGCAGTCTTGGAAATCAAG 85453
Query 81532 GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG 81591
|||||| |||| || |||||||| || ||||| ||| | |||||| ||| | |
Sbjct 85452 GCACACTCTTTCAAAGTGTCATAAATACCTTCGATAGAATCCTCCTTCATGGCAACAAGG 85393
Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGT 81649
||||| ||||| || ||| | | ||| || || ||||||| ||||| | || |
Sbjct 85392 AAACAAGAAGACATTTGTGGG--TGTGGAGTACCAGCGTTGAACAAAGTTGGAGAAGCAT 85335
Query 81650 GAATGAAATA 81659
| |||||||
Sbjct 85334 GGGTGAAATA 85325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310321582320
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